Pseudomonas cichorii JBC1, BH81_RS10570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pci02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
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| KEGG | pci03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1252 | 1271 | - |
| Coils | Coil | Coil | - | - | 596 | 619 | - |
| Coils | Coil | Coil | - | - | 373 | 400 | - |
| Pfam | PF14331 | IcmF-related N-terminal domain | IPR025743 | IcmF-related, N-terminal domain | 116 | 349 | 8.9E-44 |
| PANTHER | PTHR36153 | INNER MEMBRANE PROTEIN-RELATED | - | - | 28 | 1257 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.