Pseudomonas chlororaphis PCL1606, PCL1606_RS28135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
GAGCCCAAAGTCTTCGGCGACGAGCGCGGTTTTTTCTACGAAAGCTTCAACGCCCGCGCATTTGCGGAGGCGACCGGGGTGCACGCGCCCTTCGTCCAGG ACAACCATTCGCGCTCGCAAAAGGGCGTGCTGCGCGGCCTGCACTACCAGATCGAGAACACCCAGGGAAAACTGGTGCGGGTGGTGGCGGGCGAAGTGCT CGACGTGACGGTGGACATCCGCCGCAGCTCGCCGCACTTCGGCCAGTGGCTGGGGGTGCGCCTGTCCGCGGCCAATCATCGCCAGCTGTGGGTTCCGGAA GGTTTCGCCCACGGTTTCGTGGTGCTGAGCGAGTACGCCGAATTCCTCTACAAGACCACCGACTACTACACCCCGGCGGCCGAACGCTGCATTCGCTGGG ACGACCCGACCCTGGCCATCGACTGGCAGCTCACGGGCCCGGCGCAGCTCTCGGCGAAAGACCAGGCCGGCAAACTGCTCAGCGAAGCAGAGCTGTTTCC
DNA Sequence for Gene
>PCL1606_RS28135
ATGAGCGGGCGCTTGAAGATCCTGATCAGCGGCCAGCACGGCCAGGTGTCCCAGGCCTTGCAGCAGCGCCTGGGTAACCAGTACGAGCTGATCGTGCCGG GGCGCGAGCGGCTCGACCTGACGCAGCCGGATGCGATGCGCCAGCAGGTGCGCAGCCTGCGTCCGCACCTGATCATCAATGCCGCAGCCCACACCGCCGT CGACCAGGCGCAAAGCGAGCCGGAGCTGGCCTTCGCGATCAATGCCAGCGCACCCGGGGTGTTTGCCGAGGAAGCCCAGGCGTTGGGGATTCCGCTGATC CACTACTCCACCGATTACGTCTTCGACGGCAGCAAGCCTGCGCCCTACACCGAGGACGACGAACCCAACCCGCTGAGCGTCTACGGCCAGAGCAAACTGG CCGGTGAACGGGCCATCGCCGCGGTTGGCGGCGCGCACCTGATCCTGCGCACCAGCTGGGTGTACTCGAACACCGGAAAAAATTTCCTGCTGACCATGCA GCGCCTGTTGCAGGAAAAACCGCACCTGCGCGTGGTGGCCGACCAGATCGGCGCGCCGACCTGGGCCAGCACCATCGCCACCAGCACCGCCGCCCTGATC GAGCGCTGGCAGGCCGGCACGCCGGGAGCATGGGGCACCTATCACCTGACCGCGGACGGTGAAACCTCCTGGTTCGGCTTCGCCCAGGCCATCGGCGAAC ATCTGCTGGCCCAGGGCAAGGCCTGCGCGACCCTGGAGGCGATTCCCTCCAGCGCTTACCCGACACCCGCGCCGCGGCCTTTGAACTCGCGTCTCGATTG CAGCCGCCTGGCACGCGAGTGGGGCGTGGTGCAGCCGCAATGGCGCAACGCCTTGCGCGAGTGCCTGGCCGGTCAGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTGTACGAAAAGTCGGCAGGCGCAGGCACTTTTCCTACAGAGCCTTGGCATAATGCGCCTGTACCCACAGGCGCATGGCTCCCATGACCCCACCCCT TCCCCGACGCCCCCGCTGGCGTAGCCTGGCTTTGCTGGCCCTGTGCCTGGCGCCGCTGCTGTGGCCGCTGGAGCACCTGGCCGAGCGTTACTACCGCAGC GAACTGGCGGGCCAGAACCGCCAGACCCTGGACCTGTATGTGGCCAACCTGCTAGGCACGCTGCACCGCTATGAAGTGCTGCCGCAGATCCTCGGCGAGC TGCCGGCGCTGCGCGCGGTCCTCGGCGCGCCGGACGACGGTGTCACCCAGGGCAACGCCAACCGCCTGCTGAACAACATCAGCGCGCAGACCGGGGCCGA AGTCATGTACCTGATGGACACCGCCGGCAACACCCTGGCGGCGTCCAACTGGGACAAGCACGACAGTTTCGTCGGGCGCAATTTCTCTTTCCGCCCGTAT
Amino Acid Sequence
>dTDP-4-dehydrorhamnose reductase
MSGRLKILISGQHGQVSQALQQRLGNQYELIVPGRERLDLTQPDAMRQQVRSLRPHLIINAAAHTAVDQAQSEPELAFAINASAPGVFAEEAQALGIPLI HYSTDYVFDGSKPAPYTEDDEPNPLSVYGQSKLAGERAIAAVGGAHLILRTSWVYSNTGKNFLLTMQRLLQEKPHLRVVADQIGAPTWASTIATSTAALI ERWQAGTPGAWGTYHLTADGETSWFGFAQAIGEHLLAQGKACATLEAIPSSAYPTPAPRPLNSRLDCSRLAREWGVVQPQWRNALRECLAGQS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site