Pseudomonas chlororaphis PCL1606, PCL1606_RS28135

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pcz00521	Streptomycin biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pcz01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pcz00523	Polyketide sugar unit biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pcz01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.90.25.10	-	-	-	162	286	7.1E-107
Pfam	PF04321	RmlD substrate binding domain	IPR029903	RmlD-like substrate binding domain	6	290	3.5E-103
PANTHER	PTHR10491	DTDP-4-DEHYDRORHAMNOSE REDUCTASE	IPR005913	dTDP-4-dehydrorhamnose reductase family	5	289	6.2E-69
Gene3D	G3DSA:3.40.50.720	-	-	-	7	279	7.1E-107
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	5	290	1.65E-95
NCBIfam	TIGR01214	JCVI: dTDP-4-dehydrorhamnose reductase	IPR005913	dTDP-4-dehydrorhamnose reductase family	6	290	2.5E-99
CDD	cd05254	dTDP_HR_like_SDR_e	-	-	6	286	2.42182E-104
FunFam	G3DSA:3.40.50.720:FF:000159	dTDP-4-dehydrorhamnose reductase	-	-	7	279	2.6E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.