Pseudomonas chlororaphis PCL1606, PCL1606_RS20075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00605
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pcz00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pcz01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pcz02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 95 209 2.1E-33
NCBIfam TIGR00782 JCVI: cytochrome-c oxidase, cbb3-type subunit III IPR004678 Cytochrome c oxidase cbb3-type, subunit III 31 303 5.3E-80
PANTHER PTHR33751 CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP - - 42 302 4.3E-57
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 55 207 2.51E-31
Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal 37 83 8.9E-23
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 213 307 2.12E-22
Gene3D G3DSA:6.10.280.130 - IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily 1 94 6.3E-38
PIRSF PIRSF000006 Cbb3-Cox_fixP IPR004678 Cytochrome c oxidase cbb3-type, subunit III 1 305 7.0E-101
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 220 298 1.1E-10
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 183 205 2.6E-6
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 210 316 5.2E-27
FunFam G3DSA:1.10.760.10:FF:000013 Cbb3-type cytochrome c oxidase subunit - - 95 210 5.3E-55
FunFam G3DSA:1.10.760.10:FF:000015 Cbb3-type cytochrome c oxidase subunit - - 211 308 8.8E-44
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 131 205 5.4E-14
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 141 152 2.6E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.