Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCTCGCGGCTGCGGTCCAGGACCTGCACGCTGACCCTGGCCAGGCGCGGGTCGGGGCTGGGCCCGATGGTCTGTTCGCAGCGCAGCTTGAGCCGGCCCTG GTCGCATTCCAGACTCTTGCTGCCCGGCGGCAGGCGGCCTTCCAGGCGCAGCTGGGCCAGGTGCGACTGGGCCGCCAGCAGGGCGATGGACTTGTCTCGC AGCAGGCCGTTGCTCTGGGTCATCAGGCCGGCCACGCGCACCGCCGCCGACATGGCCACGGCGATGATCGCCAGGGCGACCAACACTTCGATCAAGGTGA AACCCTGCTGCCTGGCAGGTGCTCCGGAGGCTGGCTGGCGTGGGCCCGGCATGGATGTCTCGCAGCGTGGATGAAGGCTTGCAGGCTAACCGGCAAATTT GACCGATTGGCTACGGGCGCTCCCGAGCAACGTCAATATCACTGACATATTTTCTTGCAACACTGCGCGACGAATCGAAATCAAGCCAAGGAATGTCGAG
|
|
DNA Sequence for Gene |
>PCL1606_RS16035
ATGGATGTCGTGTACCGCAAGTCGCAGCCACAGCCCCGGTTTCAGCCCCGACGCCCGCGCGGCCAGGGCGGTTTCACCCTGATCGAGATCATGGTGGTGG TGGTCATCCTCGGGATCCTGGCCGCCATGGTGGTGCCCAAGGTGCTCGACCGTCCGGACCAGGCCCGCGCCACCGCGGCCAAGCAGGACATCGGCGGGCT GATGCAGGCCCTCAAGCTCTATCGCCTCGACCACGGCACCTACCCGAGCATGAACCAGGGCCTGAAAGTGCTGGTGGAACGCCCCGCGGACGCCAAGAAC AGCAACTGGCGCTCTTACCTGGAGCGCCTGCCCAACGACCCCTGGGGCCGTCCTTACCACTACCTCAACCCGGGGGCCAACGGTGAAGTCGATGTGTTTT CCCTGGGCGCCGACGGCCAGCCAGACGGTGACGGCGTGAATGCCGATATCGGCTCCTGGCAGCTATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCCGCCATGACAGCCCGTTCGCCGAGCGCGGCGCAACAGCGTGGCATGGCCATTATCAGCGCCTTGCTGATCGCCGCCGTGGTGGCGGTGATCGCCGG CGGCATGCTGACCCGCCAGACCCTGTTCACCCGCGCTCTGGAGAGCGAGCAACTGCGGGTCCAGGGCAGCTGGCAGCTGCAGGGCGGCCTGGAAGTCGGC CGCCAGCGCCTGTGGGAAGACCGCCAGCGCGACGTGCTGACCCGTCCCGACCAGGCCTGGGCGCGGCCGATCCAGCTGGCGGCGCTGGGCCCGGGCAGCG GGCCGTTCGAGGGCCGGCTGGAAGACGAGCAGGGCAAGTTCAACCTGCGCAACCTGCTGGCCAATGACCGCCTGGACCCGTTGCAGATCGAGAATTTCCA GCGCCTGTGCGCGTTGCTCGGGGTCAATGCGGCAGTGGGCCAGCGCATCGGCCAGCGGGTGATCGCCTCTTACCCGCGGCTGTTGGGCCCGGAAGGCGCG
|
|
Amino Acid Sequence |
>general secretion pathway protein GspG
MDVVYRKSQPQPRFQPRRPRGQGGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPSMNQGLKVLVERPADAKN SNWRSYLERLPNDPWGRPYHYLNPGANGEVDVFSLGADGQPDGDGVNADIGSWQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|