Pseudomonas chlororaphis PCL1606, PCL1606_RS16035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01710
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01710
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pcz03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30093 GENERAL SECRETION PATHWAY PROTEIN G - - 17 88 2.7E-11
NCBIfam TIGR01710 JCVI: type II secretion system major pseudopilin GspG IPR010054 Type II secretion system protein GspG 24 154 4.8E-53
Pfam PF08334 Type II secretion system (T2SS), protein G IPR013545 Type II secretion system protein GspG, C-terminal 47 153 2.7E-39
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 22 44 1.2E-7
Gene3D G3DSA:3.30.700.10 Glycoprotein, Type 4 Pilin - - 38 153 4.4E-34
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 20 44 1.4E-9
PRINTS PR00813 Bacterial general secretion pathway protein G signature IPR000983 Bacterial general secretion pathway protein G-type pilin 60 78 3.0E-16
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 51 153 2.72E-33
PRINTS PR00813 Bacterial general secretion pathway protein G signature IPR000983 Bacterial general secretion pathway protein G-type pilin 24 49 3.0E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.