Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS08405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACAAACGCATCCTGATGATCGACGGCGAACCTGTGGATTACTGCCTGGCGCGGATTCCCGCCCACGGCGAAACCCGTGGCAACCTCGCCGCCGGTGG CCGTGGCGAAGCCCGGCCGCTGACCGAGAAAGATCGCTGGATCGCCGCACAGGTCGGCCCGACCCTGCGCGAGAAAGGCCTGCTGTTCGTGGGGCTCGAC GTGATCGGTGAGCACCTGACCGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACAACGCCTTCGGCACCAATATCGGCGCAATGCTGATGG ATGCCATCGAGAAGAAACTGCAAGCTGCGAGCCGCAAGCCACAAGCTTGACGGCTGTCGCATGCAGCTTGTCGCTTGAAGCTCGAGGCTTACGGCTTGAA ACCAACATTGCGTTATCATGCGCCGCCTGTGAAACCCGCAATGTTGGTCTTGTGAAGTTTTTTGTGATGTTGAACCGCTGATGACTGTTGTGAACCGCTG
DNA Sequence for Gene
>PCH03S_RS08405
ATGGCTCTCCCTTCCGATCTGCCCCCCGAGCTGGCCCACAGCGGCGTGCGCCCGGCCGATCGCCTGGGATTTACCCTGTTCCTGGCCGCCCTGCTGCATA TCGCGCTGATTCTCGGCCTGGGTTTCTCCTTCGCCGAACCCAAGCAGATCAGCAAGACCCTGGAAATCACCCTGGCCACCTTCAAGAGCGAGACCAAGCC GAAGAAGGCCGATTTCCTTGCCCAGGAAAACCAGCAAGGCAGCGGCACCCTGGACAAGAAGGCGATCCCGAAGACCACCGAAGTGGCGCCGTTCCAGGAA AACAAAGTCAACAAGGTCACCCCGCCGCCTCCAGCCAAGACCGAAGTCAAGGAAGCCGCACCCAAGGCCGCGGTCGCCACCACCGCGCCGAAACCGAAAA AGACCGTCACCAAGCGTGAAGAGGTCAAGACCGAGGCCAAACCCAAGGTTCCCGTGCCGACGTTCGACAGCGAGCAGCTGTCCAGCGACATCGCCAGCCT GGAGGCCGAACTGGCCCAGGAGCAGCAGCTGTACGCCAAGCGCCCGCGCATCCACCGCCTGAGCGCGGCCTCGACCATGCGCGACAAGGGCGCCTGGTAC AAGGACGAGTGGCGCAAGAAGGTCGAGCGCATCGGCAACCTCAACTACCCGGAAGAAGCCCGGCGCAAGCAGATCTACGGCAACCTGCGGCTGATGGTGT CGATCAACCGCGACGGCTCGCTGTACGAAGTGCTGGTGCTGGAGTCCTCCGGCCAGCCGCTGCTGGACCAGGCGGCCCAGCGCATCGTGCGCCTGGCGGC GCCCTTCGCGCCCTTTACCGGCGACCTGTCGGATATCGACCGGCTGGAGATCATCCGCACCTGGAAGTTCGCCCGCGGCGACAGGCTGTCCAGCAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCCAGGGCGAAGCCATCCGCCCAGCCTTATCGCGAGCAAGCTCGCTCCTACAGGGACGGGGCAATACCTGTAGGAGCGAGCTTGCTCGCGATGGACCCG ATGCCGACACAGCTGCAAAAGGCCGACCAAAATGCCCGGTGCCGCGCATCCCCAGCTTGTCAGTTCGCCCCTCCACCGCCACACTAGCGCTCATGAAAAA CGTCAGCCCCAGCTACCTCAAGCATCACTTCCTGATCGCCATGCCGCACATGGCCGACCCGAACTTTGCGCACACCTTGACCTACATCGTCGAGCACAAT GCCAATGGCGCCATGGGGTTGGTGGTCAATCGTCCGCAGGACCTGAACCTCGCCGACATCCTCGAGCAATTGCGCCCCGAGATCGACCCGCCAGCGCTCT GCCAGCATGTGCCGATCTTCATCGGTGGCCCGGTGCAGACCGATCGCGGTTTTGTCCTGCATCCCAGCGGCCCGACCTTCCAGGCCACGGTCGAGCTGGA
Amino Acid Sequence
>cell envelope biogenesis protein TonB
MALPSDLPPELAHSGVRPADRLGFTLFLAALLHIALILGLGFSFAEPKQISKTLEITLATFKSETKPKKADFLAQENQQGSGTLDKKAIPKTTEVAPFQE NKVNKVTPPPPAKTEVKEAAPKAAVATTAPKPKKTVTKREEVKTEAKPKVPVPTFDSEQLSSDIASLEAELAQEQQLYAKRPRIHRLSAASTMRDKGAWY KDEWRKKVERIGNLNYPEEARRKQIYGNLRLMVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLSDIDRLEIIRTWKFARGDRLSSN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site