Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS08405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR01352 | JCVI: TonB family C-terminal domain | IPR006260 | TonB/TolA, C-terminal | 215 | 290 | 2.0E-12 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 133 | 147 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 102 | 157 | - |
| FunFam | G3DSA:3.30.1150.10:FF:000012 | Energy transducer TonB | - | - | 160 | 292 | 6.4E-38 |
| Pfam | PF03544 | Gram-negative bacterial TonB protein C-terminal | IPR037682 | TonB, C-terminal | 213 | 290 | 9.0E-15 |
| PANTHER | PTHR33446 | PROTEIN TONB-RELATED | - | - | 20 | 290 | 3.5E-20 |
| Coils | Coil | Coil | - | - | 157 | 177 | - |
| Gene3D | G3DSA:3.30.1150.10 | - | - | - | 168 | 292 | 2.0E-20 |
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 187 | 294 | 1.31E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.