Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS10715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF04321 | RmlD substrate binding domain | IPR029903 | RmlD-like substrate binding domain | 6 | 290 | 5.1E-104 |
| FunFam | G3DSA:3.40.50.720:FF:000159 | dTDP-4-dehydrorhamnose reductase | - | - | 7 | 277 | 1.6E-66 |
| NCBIfam | TIGR01214 | JCVI: dTDP-4-dehydrorhamnose reductase | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 6 | 290 | 2.8E-99 |
| CDD | cd05254 | dTDP_HR_like_SDR_e | - | - | 6 | 285 | 3.43456E-102 |
| Gene3D | G3DSA:3.90.25.10 | - | - | - | 162 | 286 | 3.9E-108 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 7 | 279 | 3.9E-108 |
| PANTHER | PTHR10491 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 5 | 289 | 9.4E-69 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 5 | 290 | 2.11E-96 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.