Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS28035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCATACTTGCGCACGCAATGCTGCAGATAACCCTGTATTTCCGCTTGCGGGGCAAACATTCGCGTCCAGCCGGGGTTGGGTTCGAATGAAAACGAGTAC AGGTGCGATGGCACATCGCAGGCCGCGCCCGGGTAACTGTTGTCCCGCCAGACGCCGCCGACATCCTGCTGTTTTTCCAGGATGATGAAGTCCGTGATGC CGGCCTTGCGCAGCGCGATGGCCATGCCGATGCCGGCAAAACCGCTGCCGATGATCACGGCGGTGAGTGGCGACGTCGATGGCAGGTCGGGTTCGAGTTG GGGCATGCAGCACCTCTTTTCTTGTTTTTTCATGGGCAGGCGCAGGTCTTCGCATGATGGGGTCCACGGCCTTCCCGGCAATCCCGATCAGCGTAGCCTG TGCGCCCATCATGCTTGCCCGGCCTCGCCAGTCCCATGACGTAAAGGGACAGATACTTTAGTATTCAGGCCAATTCTTTTCCCTGACCCGGGTAGCGAGC
DNA Sequence for Gene
>PCH03S_RS28035
ATGAACATGCTGGAGTTGTTGCGGGGACCGGCCAGTGCCCTGCTGATGGTGGATTTCGGTCGCGAAAGAGGGTTTTCGCCTGCGCAATTGCTGGCCGGTT CGGGCCTGTCGCTGACCCGGCTGGCAGATCCCAACTTCGAGCTGTCATGCACCCAGGAACTGCGCCTGATCAATAACCTGCTCAACCTGTCGGGGCACCC GCAGGGGCTGGGCTATCAAGTGGGCGCCCGCTATCACTTCTCGACCTACGGGCTGTTCGGTTATGGCCTGATCAGCAGCGCGACCGTGGGTGATGCCTTG CAGCTGGCCCTGCGGTTCTTGCCGCTGACCTACGCGATCACCCGGATCGCCTACCATGAGCAACCGTCGCTCGGCATCCTGACGTTCACCGAACCGGCGC TGGCGGATGATTCGCTCAGGGACTTCGTGATCGAGCGCGACATGGCCGCCGCCGCGGTGCTGCTCAAGGAAATAGCTGGCAGTGAGTTCTCGCTGGCGGG TTTTACCCTGAAGAAGAAACGCCCGGTCGATCAGTCGGCCGCCAGTGCCGGCAGTATTCTTGGCATGCGCCCCGACTACCTGGCCGACAGCAACAGCCTG GCCTTCGATCGTTCGCTGCTGAGCCGCCCGCTGCCCCAGGCAAACACCGTCACCGTCTCGATGTGCGAGCAGATGTGCGCGCAATTGATGGAGCGCCGGA TCCCCCGCACGGGCACCGCCAACCTGGTCCGCCAGTACCTGAACATCACCCCCCTGGGCACACCGCCAGACCTGCCGAGCATGGCCAGCCTGATCAATCT CAGCGAGCGCACCCTGAAACGGCGCCTGCACGACGAAGGCACCAGTTACCGGCACCTGCTGGAGCAGTCACGCAGCGCCGCGGCCCTGGAGCTGCTCGGC GACCCGACGCTCAAGCTGACCGACATCGCCGAAAAACTGGGCTACAGCGACCTGTCGAGTTTCTCCCAGACCTTCAAGCGCTGGTACGGCGTGTCTCCCA GAACCTATCGCCACGCGTCCAAGGCCACTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACAGGCCGGGCCAGCCCCCGCCGCCCTCGCCTACAACGTCAGGCTGCCCTCGATACAGGTCACCGCCGAACCGCCGATCCAGATTTCATCGCCGATC CGCTCGACCTGGATGCGCCCGGCCCGGCCCATGCTCAGGCCCTGGCTGACCACGTAGGACGCCGGCGCCAACCCCGCACCCAGCAGCCATTGGGCGATGC CAGCGTTGAGGCTGCCGGTGGCCGGGTCTTCCGGCATGCCGTCGCCGGCGATAAAGGCGCGCACTTCGAACTGCGCCGCGTCGCCGTCGCGCTCGGGGTT CCAGGGTGCGATCACCCCCACCGCGAGGTCCTTGAGCTGGGAATAGTCAGGTTGCAGGTCGAGCACCTGGCCGCGTTCGGCCAGCAGCACCGCCAGCCAG CCGGCGCCGTTGTCCACCCATTGCGCGTCGACGATGGCGCCGGGCGCCAGCCTCAGGCCCTGGCGCACCTGCTCCAGCAACCCGGCCTCCACCGGGCCGG
Amino Acid Sequence
>AraC family transcriptional regulator
MNMLELLRGPASALLMVDFGRERGFSPAQLLAGSGLSLTRLADPNFELSCTQELRLINNLLNLSGHPQGLGYQVGARYHFSTYGLFGYGLISSATVGDAL QLALRFLPLTYAITRIAYHEQPSLGILTFTEPALADDSLRDFVIERDMAAAAVLLKEIAGSEFSLAGFTLKKKRPVDQSAASAGSILGMRPDYLADSNSL AFDRSLLSRPLPQANTVTVSMCEQMCAQLMERRIPRTGTANLVRQYLNITPLGTPPDLPSMASLINLSERTLKRRLHDEGTSYRHLLEQSRSAAALELLG DPTLKLTDIAEKLGYSDLSSFSQTFKRWYGVSPRTYRHASKAT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site