Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS30130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCGGAAGACCTGGCCAACGATGTGCTGCACGAAACCTACCTGCGGGTCGACCGCATGGAAGAGCCGCCGAACCTGGCCCAGCCCAATGCCTACCTCTA CCGCATGGCCCTGAACATCGCCGCCGACCGCCGCCAGGCCGATGCCCGGCTGCTCACCGGCAGCGAGGTCGAGGAGCTGCTGCAGATCAGCGGCGAGGCC CTGGACCCGTCGCGGGTGGTGGGTGGGCAGAAGGAAATCCAGTCGCTGCTCAAGGCGCTCTACGAACTGCCGGCGCGCCGGCGCAAGATCTTTATCGCCG CGCGCCTGGAAGAGGCGCCGCACCTGGAAATCTCCCAGCGCTTCGGCATTTCGACACGGATGGTCGAGAAGGAAATCAAGGCGGCCCTGGGCCATTGCGC CTCGCGCCTTGAAAGAAAAGTGATTCAGCGGTTCGGTCCCGGCGCCGGAAAACCGTCCTAGTCACTAAAGGCCCCGATTAATCCGTGAGTACCCGCACGC
DNA Sequence for Gene
>PCH03S_RS30130
TTGAACATCTTTAGCATCTCCACTTCTCGGGCGACACCGGACCACCGGCTGCGCAACGAGGCCCAGGACTGGCTGCTCCTGTTGACCTCGGGGCGGGCCA CCGCGGCCGACGCCCGGGCCTTGCAGCAGTGGTGCGCGCAGAGCCCGCAGCATGCCGAGGCCTTCGAGCAGGCCAAGTTGCTGTGGCACAGCCTCAAGCC GGCCGCCGAACAATGCCAGCAGCAGGCCCAGCCGCGGCGCTTCGGGCGCCGGGCCTTTCTCGGCGGGGCGCTGGCGGCCTCGGTGGCGCTGGTGGCGGTG CGGGTCTCGGTGCCCGGCGGTTTTGCCGGGCTGAGCGCCGACTACCGCACCGAGGTCGGCGAGCAGCGCCGGGTCGAGTTGGAAGACGGGCTGAGCCTGG AACTCAACACCCAGACCCGCATCAGCCGGCGTGAGCTGGCGCAAGGCGGGCAGGGCATCGAACTGCTCGAAGGCGAGGTCGAGGTGTCGAGCCAGGGCGC GCTGCCGGTGCGGGTCCAGGCCGGCAACGGCTGGCTGAGCGCATCACAAGCGCGCTTCAACGTGCGCAATATCAACCACAGTGTCTGCGTGACCTGCATC GATGGCGCGCTGCAGGTCGAGGTCGCGGGCCGGTTGATCCGTCTGGACAGCGGCCGCCAGCTGACCTACGACAGCCGCCAGGTCGGCGAGCCGACGGCCG TGGACCCGACGGCGGTGATCGCCTGGCGCGAGCAGGTGCTGGTGTTCGACAACGCCACCCTCAACACCGTGATCGACGAGATCAACCGCTACCGCCCGGG CATGCTGGTGCTGCTCAACGCCGAGCTGGGCAAGCGCAAGGTGCAGGCGCGTTTCAATCTCAACCAGCTGGCCGGCGTGGCCCTGCTGATCCGCGACGCC TACGGGGCCAAATGCACCGAGTTGCCGGGTGGCGTGGTGTTGTTGAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCACAAAACCGGTAGGCGCGACGCTGGCTCGCGATAGCGTCCGTTCCGGCCAACCGCGTTGCCTGGATCGCGGGCAAGCCTCGCTCCTACGGAATCGCC GTCGACCCGTAGCCGCTGCATTAACTGCGTTGCCGCTGTAGCCGCTGCGGAGCGTAGCGAGGCTGCGATCGAGGACGAAGTCCTCGCAAAACCTGTGTAC GCGGTTTATCGGGAAGAATGGGTTGCCTGGTTTACGGCCGCTGCGCTGCCGATCGCAGCCTCGCTACGCTCCGCAGCGGCTACAACGGCATCCAGCCCGA TGCGGCAATTACTCCAACGGCCCCAGCACCTGGCGATAACGTTCTTCGCCTTGGGGTGTTTGCCGCACCAGGCGGATTTCCAGGCCCGGTGGGTTTTCCT TGCGGTTGCCGCTGAGCTGGCGCCAGCCCTTGTCCCGATCCCAGACCCGCAGCTGCAAGTCGCTGACATGCTCCAGCACCGCCACGGCGTTTTTCGGCGC
Amino Acid Sequence
>iron dicitrate transporter FecR
MNIFSISTSRATPDHRLRNEAQDWLLLLTSGRATAADARALQQWCAQSPQHAEAFEQAKLLWHSLKPAAEQCQQQAQPRRFGRRAFLGGALAASVALVAV RVSVPGGFAGLSADYRTEVGEQRRVELEDGLSLELNTQTRISRRELAQGGQGIELLEGEVEVSSQGALPVRVQAGNGWLSASQARFNVRNINHSVCVTCI DGALQVEVAGRLIRLDSGRQLTYDSRQVGEPTAVDPTAVIAWREQVLVFDNATLNTVIDEINRYRPGMLVLLNAELGKRKVQARFNLNQLAGVALLIRDA YGAKCTELPGGVVLLS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site