Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS30130
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30273 | PERIPLASMIC SIGNAL SENSOR AND SIGMA FACTOR ACTIVATOR FECR-RELATED | IPR012373 | Fe(2+)-dicitrate sensor, transmembrane component | 16 | 297 | 1.5E-38 |
| Pfam | PF04773 | FecR protein | IPR006860 | FecR protein | 114 | 203 | 2.8E-11 |
| PIRSF | PIRSF018266 | FecR | IPR012373 | Fe(2+)-dicitrate sensor, transmembrane component | 8 | 316 | 9.4E-62 |
| Gene3D | G3DSA:2.60.120.1440 | - | - | - | 109 | 237 | 2.8E-15 |
| Pfam | PF16220 | Domain of unknown function (DUF4880) | IPR032623 | FecR, N-terminal | 20 | 59 | 1.2E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.