Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATTTCCACGGCGCGGTCATGGTATTCGCTGGGCGCGCGGAAGGGGTTCTCATCGGCCCACTCTTCGCCCAGATCGGGCAGTCCCTTGGTTTCCACAGGCT GCGGCGTGACGTCGCCGTGGGCCAGAGCGAGGCCCGATACGCCGATGAAGCCTGCAGCCAGCAGAGCACGCAGAAGATTGTTCTTGTTCATGGACTACCA CCCTTGGTTCGTTGAATCTGAGCAAGGCTGCTCCTGAACGGAGCGCATGGCAGGCATCTTGAAACCGGCGGCGTCCCGGCAGAATCCTGCTTTGGATGCC ATGCCCTACTCCCTTGGTAGTAGCGCCTGCGACCTGCGGGTGAGCGCCTGTAGTAGCAAGGCGAAATCACAGCAGTTCGGGAACGCATCCCGGCCTCGCC GGGCGTTTTTCCGTTTCGACGCGCAGGGCGCGCTCCCACTATTCGAAGCGCCAGGCCACCAGACGGCGGCCTCGTTCGACTAGACAAGGGAAACGCAACC
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DNA Sequence for Gene |
>CL52_RS09595
ATGACAACAAGATCGCACCCCGGCAGCAAACGCCCCCTCGCCCTCGCCGTGCATTGCCTCGCCCTGGCCGGCAGCCTGGCGCTGGCCGGCGCCGTGCAGG CCAAGACCGTCAGCTGGGAAGACATCGCCAACGACCACCTCACCACCCGCGACGTGCTGCAATACGGCATGGGGACCAGCGCACAACGCTACAGTCCGTT GGCGCAGGTCAATACCGAGAACGTCTTCAAGCTGACACCGGCCTGGTCCTACTCCTTCGGTGACGAGAAGCAGCGCGGCCAGGAGTCGCAGGCCATCGTC CATGACGGCGTCATCTACGTCACCGGCTCCTATTCGCGGGTGTTCGCCATCGACGCCAAGACCGGCAAGCGGCTGTGGAACTACACCCATCGCCTGCCCG ACGACATCCGCCCGTGCTGCGACGTGGTCAACCGCGGCGCCGCAATCTATGGCGACAAGATCTTCTTCGGCACGCTGGACGCCGCGGTGGTCGCGCTGAA CAAGGACACCGGCAAGGTGGTGTGGAAGAAGAAATTTGCCGATCACGGCGCCGGCTACACCATGACCGGCGCACCGACCATCGTCAAAGACCAGAAGACC GGCAAGGTGCTGTTGATTCACGGCAGCTCGGGCGACGAGTTCGGCGTGGTCGGCCAGCTGTTTGCGCGCGACCCGGACACGGGCGAGGAAGTCTGGATGC GCCCCTTCGTCGAAGGGCACATGGGGCGTCTCAACGGCAAGGAGAGCACGCCGACCGGCGACGTCAAGGCGCCCTCCTGGCCGGATGATCCCAACCACCC GACCGGCAAGAAGGAAGCCTGGAGCCACGGGGGCGGCGCTCCCTGGCAGAGCGCCAGTTTCGATCCGCAGACCAACACCATCATTGTCGGCGCCGGCAAC CCGGCTCCCTGGAATGGCTGGGCGCGTACCGCCGACGGTGGTGATCCGAAGGACTACGACAGCCTTTACACCTCCGGCCAGGTCGGCGTCGATCCGAGCA CCGGCGAGGTCAAATGGTTCTACCAGCACACGCCGAACGACGCCTGGGACTTCTCCGGCAACAACGAACTGGTGCTGTTCGATTACAAGGACAAGAACGG CAAGACGGTGAAAGCCACGGCCCATGCCGACCGCAACGGTTTCTTCTACGTCGTCGATCGCACCTCCGGCAAGCTGCAGAACGCCTTCCCCTTCGTCGAC AACATCACCTGGGCGAGTCACATCGACCTGAAGACCGGTCGCCCGGTGGAGAACGAGAACCAGCGCCCGCCGCTGCCCGAGCCCGGCGAGAAGCATGGCA AGTCGGTGGAAGTCTCGCCGCCGTTCCTCGGCGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGACACCGGGTTGTTCTATGTTCCGGCCAACCACTG GAAGGAGGACTACTGGACCGAAGAGGTCAGCTACAAGAAGGGTTCGGCCTACCTTGGCCAGGGCTTCCGCATCAAGCGGATGTACGACGACCACGTGGGG ATCCTGCGGGCGATGAACCCGACCACCGGCAAGGTGGCCTGGGAGCACAAGGAAAAACTGCCGCTGTGGGCCGGCGTGCTGGCCACCAAGGGCGGCCTGG TGTTCACCGGCACTGGCGACGGTTTCTTCAAGGCCTTCGACGCCAAGACCGGCAAGGAGCTTTGGAAATTCAACGTCGGCACCGGGATCATCGCCCCGCC GATCACCTGGGAGATGGACGGCGAACAGTACATCGGCGTAACGGCCGGCTATGGCGGCGCCGTGCCGCTGTGGGGTGGCGACATGGCGGTGCTGACCAAG CCGGTCGCCCAGGGCGGTTCGTTCTGGGTCTTCAAACTGCCTGAATGGGACAAGAAGACCGCGCAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGCCAGGCCGTGCCGAGCAGGCACGGCCCTCGCCGCCCTACCCGGCCGGCGAACATCGCCCGCCCTTCGGTCCCGAGTTGGCGCTCTCGCCGAAGGGC GAGGCGGTGTTTCGCATGGCCTTCCCGGGTCGCCCGGTGCGACCGGAACTGCCGGAGCCATCCCCATGAAGATAATCAACGCCCTGCTGTTGCCCCTGGT CCTGCTGGGCAGCGCCCATGCGCTTGCCGAAGACGACGCGCGCCTGGTCATCAACGGCTGCGTCATCGAGCCGGACAGCCAGTGTCCGAACGCCGACCTG CGCGGTGCGAACCTCGCCAACCAGGATCTGCGCCGGATCAACCTCGCCGGCGCAGACCTCAGCGGTGCCGACCTGCGCCACGCCAATCTCGACCTGGCCA ATCTGGAAAAAGCCAGGCTCAAAGGCGCCAACCTCACCCGTGCCAGCCTGCAACAGGCCAATCTGCGCCTGGCCGACTTCAGCGAGGCGCGGCTGGTCGC
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Amino Acid Sequence |
>quinonprotein alcohol dehydrogenase
MTTRSHPGSKRPLALAVHCLALAGSLALAGAVQAKTVSWEDIANDHLTTRDVLQYGMGTSAQRYSPLAQVNTENVFKLTPAWSYSFGDEKQRGQESQAIV HDGVIYVTGSYSRVFAIDAKTGKRLWNYTHRLPDDIRPCCDVVNRGAAIYGDKIFFGTLDAAVVALNKDTGKVVWKKKFADHGAGYTMTGAPTIVKDQKT GKVLLIHGSSGDEFGVVGQLFARDPDTGEEVWMRPFVEGHMGRLNGKESTPTGDVKAPSWPDDPNHPTGKKEAWSHGGGAPWQSASFDPQTNTIIVGAGN PAPWNGWARTADGGDPKDYDSLYTSGQVGVDPSTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKNGKTVKATAHADRNGFFYVVDRTSGKLQNAFPFVD NITWASHIDLKTGRPVENENQRPPLPEPGEKHGKSVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYKKGSAYLGQGFRIKRMYDDHVG ILRAMNPTTGKVAWEHKEKLPLWAGVLATKGGLVFTGTGDGFFKAFDAKTGKELWKFNVGTGIIAPPITWEMDGEQYIGVTAGYGGAVPLWGGDMAVLTK PVAQGGSFWVFKLPEWDKKTAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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