Pseudomonas balearica DSM6083 (=SP1402), CL52_RS09595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10277
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pbm01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm00010 Glycolysis / Gluconeogenesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm00625 Chloroalkane and chloroalkene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.140.10.10 - - - 35 616 0.0
NCBIfam TIGR03075 JCVI: PQQ-dependent dehydrogenase, methanol/ethanol family IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family 33 586 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 315 342 680.0
PANTHER PTHR32303 QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) - - 33 588 9.8E-55
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 48 609 0.0
FunFam G3DSA:2.140.10.10:FF:000003 Methanol dehydrogenase, large subunit - - 35 616 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 413 435 -
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 532 568 1.3E-8
Pfam PF13360 PQQ-like domain IPR002372 Pyrrolo-quinoline quinone repeat 82 252 1.9E-15
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 147 178 1.1E-4
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 97 129 8.7E-6
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 475 517 180.0
MobiDBLite mobidb-lite consensus disorder prediction - - 242 280 -
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 197 235 190.0
CDD cd10277 PQQ_ADH_I IPR034119 PQQ-dependent type I alcohol dehydrogenase 42 613 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 526 558 3.0E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.