Pseudomonas aeruginosa LESB58, PALES_49031 (ampD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AAATCGTCCTGACCTCGCCGGACGCCGCCCCGGCGCCTGTCGAGAGCGAAGTGCGCCTGCCGGACAACGACGAGGCACTGCTGCGGGTCGATGCGCTGCG TGTCGGCAGTTGGGTGGAGATCCAGGAGGACGCCGAGCACAAGCTGCGCTGCAAGCTGGCGGCAGTGATCCGGCCCACCGGGCGCTACATCTTCGTCAAT CGCACCGGGATGAAGGTCCTGGAAAAGACCCGCATGGGCCTGGCGGTGGAGTTTCGCCGGCAGGCGGTACGCCTGCTGGACGATGCCTTGCTGTTCGACC GGGCCCTGGAGTCGGTGATCGGCAACCTGCGGCGCCTCAAGGGCGCCTAGCCGCTTCTCGAGGACCCGGCGGATGCCGGGTCTTTTCTTTCTTGCGGGTA ATACCTTTCCTCGACGCATGTCGAAGCGGCCGATCCAGAGCCCGCCTGATCGTCATTCCGGCGCCGCTGGATTAGAGTGGGGGCTCGTTCAGGAGCCCGT
DNA Sequence for Gene
>PALES_49031 |ampD
ATGCATTTCGATTCCGTTACCGGCTGGGTCCGTGGCGTCCGCCACTGCCCTTCACCGAATTTCAACCTGCGTCCGCAAGGGGACGCGGTGTCGCTGCTGG TCATCCACAATATCAGCCTGCCGCCGGGACAGTTCGGCACCGGCAAGGTCCAGGCGTTCTTCCAGAATCGCCTGGACCCGAACGAACATCCCTATTTCGA GGAGATCCGCCACCTGACGGTTTTCGCGCATTTCCTCATCGAACGCGACGGCGCCATCACCCAGTTCGTCTCCTGTCACGACCGCGCCTGGCATGCCGGG GTTTCCTGCTTCGACGGTCGCGAGGCGTGCAACGACTTCTCCCTTGGCATCGAACTGGAGGGGACCGACACGGAACCGTACACGGACGCGCAGTACACTG CCCTGGCCGGGCTGACGCGGCTGTTGCGCGCGGCCTTCCCGGCGATCACCCCGGAACGCATCCAGGGCCACTGCGATATCGCCCCGGAGCGCAAGACCGA TCCCGGCGAGGCTTTCGACTGGTTGCGCTACCGCGCCGGATTGACCGATTCCAAGGAGGAAACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTTCCTGGTGTTGCTGCTGGCCCTTGCGCTGGAGAAGTTCTCCGGCTGGCGCCGGCGTATCCAGCGCGATGGCGCCTGGCTCGCCTGGCTGAGCCTGGT CGAGGACCTGCCCTCGGTGTCCCGCCGCTCCTGGCTGGGGCTGCTGCTCGCGGTAGTCCTGCCGTTGCTGCCGCTGGCCCTGTTGCTGACATTGCTGCAG CCGCTGGCCTATGGCTGGCTGAGTCTTCCGCTGCATCTTCTGGTGGTGGTCTACAGTCTCGGCCGCGGCGACGTCATGGCCGACCTCGGGCCGTTCCGCG ACGCCTGGAGGCGCGAGGAGGCCCAGGCTGCCTTCCATGTCGCCGAACGCGATCTGGGGATCCTGGGCGGCAGCGAGAGCGAACTGATCGGCCGGGTGCA CGGCCATCTGCTCTGGCAGGGCTACCAGAGCTTCTTCGCGGTGATCTTCTGGTATGCCTTGCTCGGCCCGGTGGCGGCCCTGGCCTATCGCCTGCTGGCA
Amino Acid Sequence
>N-acetyl-anhydromuranmyl-L-alanine amidase
MHFDSVTGWVRGVRHCPSPNFNLRPQGDAVSLLVIHNISLPPGQFGTGKVQAFFQNRLDPNEHPYFEEIRHLTVFAHFLIERDGAITQFVSCHDRAWHAG VSCFDGREACNDFSLGIELEGTDTEPYTDAQYTALAGLTRLLRAAFPAITPERIQGHCDIAPERKTDPGEAFDWLRYRAGLTDSKEET
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site