Pseudomonas aeruginosa LESB58, PALES_39841 (lasR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAACTGGAAAAGTGGCTATGTCGCCGGGTCCGTGCCCGGCAGGCCTGACGCCGCGAGGTCGCCCCCTTGGCCGCGGCGCTGTGCCTTTGCGCGTGCGC CGCGCACAGACGTCTGCGCCTCGGATCGCCCGGCCGAGAGCGGTCGCACGCGTGGCGATGGGCCGACAGTGAACCCGGGGACCAGGTGTGACTGGGTATT CAGTTCGCATAAAATGTGATCTAGATCACATTTAAACGTTTGCTTACCCTCTAGGACGGGTATCGTACTAGGTGCATCAAACGCTGCGGTCTATTGTTAA GTGGGACTGAAATGTGCCTTTCCGGCACAACGCCAACTCTATAGAGTGGGCTGACTGGACATCTTCAGGGGTCGTCGGGCACGGGCGCATGCGCCTCGGC AGGAAGCCGGGATTCTCGGACTGCCGTACAACGTGCCGGATATCGGGTGCCGAATCCATATTTGGCTGATTGGTTAATAGTTTAAGAAGAACGTAGCGCT
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| DNA Sequence for Gene |
>PALES_39841
|lasR
ATGGCCTTGGTTGACGGTTTTCTTGAGCTGGAACGCTCAAGTGGAAAATTGGAGTGGAGCGCCATCCTGCAGAAGATGGCGAGCGACCTTGGATTCTCGA AGATCCTGTTCGGCCTGTTGCCTAAGGACAGCCAGGACTACGAGAACGCCTTCATCGTCGGCAACTACCCGGCCGCCTGGCGCGAGCATTACGACCGGGC TGGCTACGCGCGGGTCGACCCGACGGTCAGTCACTGTACCCAGAGCGTACTGCCGATTTTCTGGGAACCGTCCATCTACCAGACGCGAAAGCAGCACGAG TTCTTCGAGGAAGCCTCGGCCGCCGGCCTGGTGTATGGGCTGACCATGCCGCTGCATGGTGCTCGCGGCGAACTCGGCGCGCTGAGCCTCAGCGTGGAAG CGGAAAACCGGGCCGAGGCCAACCGTTTCATGGAGTCGGTCCTGCCGACCCTGTGGATGCTCAAGGACTACGCACTGCAGAGCGGTGCCGGACTGGCCTT CGAACATCCGGTCAGCAAACCGGTGGTTCTGACCAGCCGGGAGAAGGAAGTGTTGCAGTGGTGCGCCATCGGCAAGACCAGTTGGGAGATATCGGTTATC TGCAACTGCTCGGAAGCCAATGTGAACTTCCATATGGGAAATATTCGGCGGAAGTTCGGTGTGACCTCCCGCCGCGTAGCGGCCATTATGGCCGTTAATT TGGGTCTTATTACTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTTGCCTCTCAGGTCGGCGAGCTGGCGATCGGTAATTTGCCCTTCTATATAGAAATGCAAAAGCAGATATATAGGGAAGGGCAGGTTCTCGCCATTCTC GAAACGACTGCCGCAGGATTGGCTTATCCCGAAGCGGCTCCAGAAAGTTTCCTGGCTTTCCCGTCGGGCGGTGCGGGTGGCCTTTGCCCGGAAGGCCATG TTTTGGGGCTGTGTTCTCTCGTGTGAAGCCATTGCTCTGATCTTTTCGGACGTTTCTTCGAGCCTAGCAAGGGTCCGGGTTCACCGAAATCTATCTCATT TGCTAGTTATAAATTTATGAAATTTGCATAAATTCTTCAGCTTCCTATTTGGAGGAAGTGAAGATGATCGTACAAATTGGTCGGCGCGAAGAGTTCGATA AAAAACTGCTGGGCGAGATGCACAAGTTGCGTGCTCAAGTGTTCAAGGAGCGCAAAGGCTGGGACGTTAGTGTCATCGACGAGATGGAAATCGATGGTTA
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| Amino Acid Sequence |
>transcriptional regulator LasR
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHE FFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVI CNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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