Pseudomonas aeruginosa LESB58, PALES_39841 (lasR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA1430	ECO:0000249 sequence similarity evidence used in automatic assertion	1902216
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA1430	ECO:0000249 sequence similarity evidence used in automatic assertion	1902216
Biological Process	GO:0051544	positive regulation of elastin biosynthetic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA1430	ECO:0000249 sequence similarity evidence used in automatic assertion	1902216
Biological Process	GO:0009405	pathogenesis	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA1430	ECO:0000249 sequence similarity evidence used in automatic assertion	8454322
Biological Process	GO:0060310	regulation of elastin catabolic process	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA1430	ECO:0000249 sequence similarity evidence used in automatic assertion	1902216
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00196	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other LESB58 genes in this class Transcriptional regulators Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	207	219	1.7E-5
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	176	231	2.9E-22
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	176	237	7.8E-17
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	174	231	5.2E-19
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	177	233	5.85301E-20
Gene3D	G3DSA:3.30.450.80	-	IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	1	173	5.4E-56
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	177	191	1.7E-5
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	170	237	7.82E-16
PANTHER	PTHR44688	-	-	-	55	236	5.8E-21
Pfam	PF03472	Autoinducer binding domain	IPR005143	Transcription factor LuxR-like, autoinducer-binding domain	18	160	1.2E-37
SUPERFAMILY	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors	IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	9	160	2.62E-36
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	191	207	1.7E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.