Pseudomonas aeruginosa LESB58, PALES_02611 (gabD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATTTTCCGACTTTCGTTGATTTTATCGAACGGGGTATTGCCCTTTGTCAGTGGTGGCCCTAGGATTCGTTTGAGATTTCAAACGCCCCCAAAGCCACAA CAACAGGAGACCGGGGAATTGGCATCAGTTCAGCCGGCCGCGTGCCCCTGGAATGACCTCTTTCTGACCTGCCCGTCGCTCGTCCGGCCTTTCGCGCTGC CGGGCCGCCGTGGTGCCGGCGTGGCGTTTCGTCCGCGATCCCTTTCCCGCACGAGCCTTTCGTATCCTCCCCGACGCCTGCCGGCGGTCGCGTTCTTCCG CGTCCGCCCGTTGCGCACGGTGGCCGGCCGGTAACGGCGACGCCGCTGGCACAGGGCGCAGGAAATGGAACACCGGGGCGCTGGCCCTTTCGAATAACCA GCAGGCAACACTTTCCGGTTACAACCGAACCAGACAACCAGGCACGCGGGGTAGTCGAGGTAGACCCGCTGCTCACGGCATTCCTCGAAGGAGACAGGTC
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| DNA Sequence for Gene |
>PALES_02611
|gabD
ATGCAACTCAAAGATGCCAAGCTGTTCCGTCAACAAGCCTACGTCGATGGCGCCTGGGTGGATGCCGACAACGGCCAGACCATCAAGGTGAACAACCCGG CCACCGGCGAGATCATCGGCAGCGTGCCGAAGATGGGCGCCGCCGAGACCCGCCGCGCCATCGAGGCTGCCGACAAGGCCCTGCCGGCCTGGCGCGCGCT GACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTCGACCTGATGATCGAGAACCAGGACGACCTGGCCCGCCTGATGACCATCGAGCAGGGCAAG CCGCTGGCCGAGGCCAAGGGCGAGATCGCCTACGCCGCCTCCTTCCTCGAATGGTTCGGCGAAGAAGCCAAGCGCATCTACGGCGACACCATTCCCGGCC ACCAGCCGGACAAGCGCATCATCGTGATCAAGCAGCCGATCGGTGTGACCGCGGCCATCACGCCGTGGAACTTCCCCTCGGCGATGATCACCCGCAAGGC CGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGCTCAAGCCTGCTTCGCAGACCCCGTATTCCGCCCTGGCCCTGGCCGAACTGGCAGAGCGCGCCGGC ATTCCGAAGGGCGTGTTCAGCGTGGTCACCGGTAGCGCCGGCGAAGTCGGCGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGACCTTCACCGGTT CCACCGAAATCGGCCGCCAACTGATGGCCGAGTGCGCCCAGGACATCAAGAAGGTGTCCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGACGCCGCCGTCGAGGGCGCGCTGATTTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACCGCCTGTACGTGCAGGACGGC GTGTACGACGCCTTCGTCGACAAGCTGAAGGCCGCCGTGGCCAAGCTGAACATCGGCAACGGCCTGGAAGCCGGCGTGACCACCGGTCCGCTGATCGACG CCAAGGCCGTGGCCAAGGTCGAGGAACACATCGCCGACGCGGTCTCCAAGGGCGCCAAGGTGGTTTCCGGCGGCAAGCCGCACGCCCTCGGCGGCACCTT CTTCGAGCCGACCATCCTGGTCGACGTGCCGAAGAACGCCCTGGTGTCCAAGGACGAGACCTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAG GCCGAGGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTTCCGCGTCGCCGAGCAACTGG AGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCAAGGCCTCGGGCCTGGGCCGCGAAGGTTCCAAGTA CGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTGGGCGGTATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGGCGAGGAACGCATCCGGAGGGGCCGGACGGCAGGCAAGAGCTGCGCCGTCCGGTGTCGACGTTGCCGGTGGTGGCACCGGACGAACCGGGAGACG CGGTCGCCGATCGCGAAGCGGCTCCGAGCCCTGGCGGGCCTGCAAGTCCCGAGGCAGTCGATCATCGCATGCTGCCTTGGGGAGCTTCCTTCCCGCCTTC ATCCTTTGACCCGGCCGACCCGATGAGCGGCCACTGAGGAAGCCATGAGCAAGACCAACGAATCCCTGCTGAAGCGTCGCCAGGCCGCGGTACCCCGCGG CGTGGGCCAGATCCACCCGGTCGTCGCCGAGCGCGCCGAGAACTCCACCGTCTGGGACGTGGAAGGCCGCGAGTACATCGACTTCGCCGGCGGCATCGCC GTGCTGAACACCGGCCACCTGCATCCGAAGGTGATCGCCGCGGTCCAAGAGCAACTGGGCAAGCTGTCCCACACCTGCTTCCAGGTGCTGGCCTACGAAC
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| Amino Acid Sequence |
>succinate-semialdehyde dehydrogenase I
MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWFDLMIENQDDLARLMTIEQGK PLAEAKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLKPASQTPYSALALAELAERAG IPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDG VYDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDE AEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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