Pseudomonas oryzihabitans NBRC 102199, POR01S_RS14690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1909 2090 2.23E-34
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1023 1143 6.8E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1559 1688 2.6E-21
Coils Coil Coil - - 1806 1826 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2256 2374 4.27E-37
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2098 2232 2.1E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2258 2369 4.4E-27
MobiDBLite mobidb-lite consensus disorder prediction - - 1372 1395 -
Coils Coil Coil - - 1254 1274 -
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2256 2369 1.6E-37
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2258 2369 1.29222E-29
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 718 804 3.0E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 8.37E-20
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 716 813 7.4E-4
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1246 1367 2.09E-20
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1419 1549 2.0E-31
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 96 9.9E-7
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1245 1347 0.11
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1768 1907 2.5E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2053 2071 2.6E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1242 1370 8.4E-21
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1906 2092 1.1E-51
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1952 2093 6.3E-21
Coils Coil Coil - - 1185 1213 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1997 2011 2.6E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 717 812 2.58318E-8
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1908 2092 5.1E-58
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2092 2229 6.15E-26
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1420 1517 1.5E-5
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1250 1348 1.9E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1564 1669 5.36E-17
Gene3D G3DSA:3.40.50.2300 - - - 2258 2377 4.4E-41
Coils Coil Coil - - 67 87 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1186 1220 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 717 838 1.65E-24
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 881 973 3.9E-11
MobiDBLite mobidb-lite consensus disorder prediction - - 628 660 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 716 848 3.8E-25
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1566 1639 8.4E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1422 1520 1.8E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2077 2090 2.6E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 566 599 -
Coils Coil Coil - - 1616 1636 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1564 1663 5.8E-7
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1246 1347 1.05231E-5
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 879 1002 6.15E-18
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1422 1518 7.51042E-11
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1564 1664 1.7077E-14
SMART SM00260 chew_2 IPR002545 CheW-like domain 2085 2229 1.6E-32
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1024 1141 1.62E-8
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 136 5.1E-10
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 879 975 2.0E-4
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2167 2229 8.5E-19
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1956 2092 3.9E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1420 1542 1.01E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 550 4.71E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 873 1006 1.1E-19
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 719 869 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 1186 1232 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 879 976 3.05218E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.