Pseudomonas oryzihabitans NBRC 102199, POR01S_RS14275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGACCTTGAG-N1-CTCAAGGTCA | 108626 | 108646 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CACCTGCCGTTGCCCG-N1-CGGGCAACGGCAGGTG | 108791 | 108823 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTGGCGACCG-N100-CGGTCGCCAC | 110945 | 111064 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GAAAAAGCCCCGG-N12-CCGGGGCTTTTTC | 111353 | 111390 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 26 | 111359 | 111384 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 27 | 111359 | 111384 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |