Pseudomonas sp. M1, PM1_RS17675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGTGGCTTTTTTCTATGTTGGTTGCGGGAGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGCCGG CCATTTTACTCGGGATGAACACCCTGTCAATCGATTTCTGCTTTCCGATCAATTATTTAAATTGAGCGCAAACGAAAAAGGCCACTCCGAAGAGTGGCCT TTTTCTATGTTGGTTGCGGGAGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGGCGGCCATTCTAC TCAGGACGGCTACCCTGTCAACCGTTTTTTCAGAAAAACTGGTTTTTCTTCAGATGCTTAGCGAAGCGGGGCCGCAGCGGGCGGGCGGCGCAGGCGTTCG CGCCGTTTTGCATTACCATGGAAGCCTTCAGCTAATGCGCTGGAACGGACGGGGTATCTCCTCCGAGTTCCGGCGCTATCCCCTCCGAGCAGGTTCCGCG
DNA Sequence for Gene
>PM1_RS17675
TTGAGTTCCCGGCAGCGAAAGATCATCCACATCGATTGCGACTGCTTCTACGCCGCCATCGAGATGCGCGACGACCCGAGCCTTGCGGGCAAGCCGCTGG CCGTGGGCGGCTCGCCGGACAAGCGCGGGGTGGTCGCCACCTGCAACTACGAGGCGCGCGCCTACGGCCTGCACTCGGCCATGGCCATGCGCACCGCGGT CAAGCTGTGCCCGGACTTGACCATCGTGCGCCCGCGCATGGACGTCTATAAAGGCGTGTCGCGGGAAATCCACGGGATCTTCCGCGACTACACCGACCTC ATCGAGCCGCTGTCCCTGGACGAGGCCTACCTCGACGTCAGCGACTGCCAGCAGTTTTCCGGCAGCGCCACGCTGATCGCCCAGGACATCCGCCGGCGCG TCTGGTCGTCGCTGGGCATCACGGTTTCCGCCGGGGTGGCGCCGAACAAGTTCCTGGCCAAGATCGCCAGCGACTGGCGCAAGCCCAACGGCCTGTTCGT GGTCACCCCGGAGCAGGTCGAGGACTTCGTCGCCGAGCTGCCGGTGAAGAAGCTCCACGGCGTGGGCAAGGTCACCGCCGAGAAGCTGGCGCGCCTGGGC GTGCAGGACTGCCGACAACTGCGCGACTGGTCGCGCCTGGCGCTGGTGCGCGAGTTCGGCAGCTTCGGCGAGCGCCTGTGGAACCTCGCCCGTGGCATCG ACGAGCGCCCGGTGCAGGTGGACAGCCGGCGCCAGTCGATCAGCGTGGAGAACACCTTCGACCGCGACCTGCCCGACGTCGACGCCTGCCTGGCCGAGCT GCCCGGCCTGCTCGACGAACTGCAGCGGCGCATGCAGCGCCTGGACGCCAGCTACCGGCCGGGCAAGCCCTTCGTCAAGCTGAAATTCCACGACTTCACC CAGACCACCCTGGAGCAGGCCGGCGCCAGCCGCGACCTGGACAGCTACCGGCTGCTGCTGGCCCAGGCCTTCCAGCGTGGCGAGCGGCCGGTGCGGCTGA TCGGCGTGGGCGTGCGCCTGGAAGACCTGCGTGGCAGGGCCGAGCAACTGAACCTGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTTGCCGGCGTTGGGTAAAAGTCCGATCATGCGCAGCGCGTAGCCAGGGCCCCGAGCATGCGAATCCACGTCACCTTCACCGACCGCGTCGGCATCAC CCAGGAAGTCCTGGCGCTGCTGGGCGCGCGCAACCTGAATCTGGACGCGGTGGAGATGGTGCCGCCGAACGTCTATATAGACGCCCCCGAGCTGCGCCAG GAAGTGCTCCACGAACTGCACGGCGCGTTGCTGCGGGTACGTGGCGTGCTCTCGGTGCAGATCGTCGACATGCTCCCCGGCCAGCGCCGCAGCCTGCACC TGGACGCGCTGTTGGCGGCCATGGGCGACCCGGTGCTGGCGGTGGACGCACAGGCCCGGGTGCTGCTGGCCAACCCGCGGTTGATCGACCTGTGCGGCCG CCAGCCGGCCGGCGAGTCGCTGTCCACCCTGTTCGACGAACCGGGCCTGGCCGAGCACCTGATGGAGAAGGGCTTCCGCCTGCCGATGCACGAGGTCAGC
Amino Acid Sequence
>DNA polymerase IV
MSSRQRKIIHIDCDCFYAAIEMRDDPSLAGKPLAVGGSPDKRGVVATCNYEARAYGLHSAMAMRTAVKLCPDLTIVRPRMDVYKGVSREIHGIFRDYTDL IEPLSLDEAYLDVSDCQQFSGSATLIAQDIRRRVWSSLGITVSAGVAPNKFLAKIASDWRKPNGLFVVTPEQVEDFVAELPVKKLHGVGKVTAEKLARLG VQDCRQLRDWSRLALVREFGSFGERLWNLARGIDERPVQVDSRRQSISVENTFDRDLPDVDACLAELPGLLDELQRRMQRLDASYRPGKPFVKLKFHDFT QTTLEQAGASRDLDSYRLLLAQAFQRGERPVRLIGVGVRLEDLRGRAEQLNLF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site