Pseudomonas sp. M1, PM1_RS12105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGCCGCAGGAGGCGCCGCGCATTGCCCGCTACGACGACCTGCTCGGCCCCACCATCGGCTACGTGCTGGAGTCCGCCTACTTCGAACCCTTCGACTCC GACAAGCGCCTGAAGAAATTCGGCGTGAACAACGAGACGCAACTGCTGCAGATGCTCTCCCTCGGCCGCCTGCAACTGGTGATCGGCACCGACTGCCAGG TGGACTACGAACTGCGCGACCCGCAACTGGCCCGGCAGATCGTGCGCACCCGCTTCCAGCCGGACAGCCGCACCGAGCTTTACCTCGGCTTCTCCCACCA GCGCCCGCTGACGGCCGAGCGCCAACTGATCGAAGGCGCGCTGCGGCAGATGCTCGACGAGGGCTGGGTGCAACGGGCGGCCGCGCGCTATCAGCGCACG GATGGGCAGTAGCGCGCCGGACGGGCGAACGGGCGGAGCGCTGCGCAAAACGCTTACAATGGCGGGTTATTCATCTCATTTTTTGTCGTGGTAAACCCGC
DNA Sequence for Gene
>PM1_RS12105
ATGGAAATAAAGGTTAATTTCTTAGATAACCTTCGGCTCGAAGCCAAGTTCGACGATTTCACCGTGGTTGCCGACCAGCCCATCCGCTACAAGGGCGATG GCTCCGCACCGGGTCCGTTCGACTACTTCCTGGCTTCGTCGGCGCTGTGCGCGGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACATCCCCACCGA CAACATCCGCCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACAAGCAGATCTTCAAGATCCAGGTGGAGCTGCCGGCGGACATCTCGGAAAAG GACCGCCAGGGCATCCTGCGCTCCATCGAGCGCTGCACGGTGAAGAAGGTGGTGCAGACCGGGCCCGAGTTCGTCATCGAGGAAGTGGAAAACCTCGACG CCGACGCCCAGGCGCTGCTGATGCCCAGCGCCGATGCGGACTCGCGCACCTACATCGCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACATGTC GGCGATCCTCGCCGGCCTGGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGCCTGGTCGCTGCACATCCGCGACGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGACCAAGGAAAGCGCGCTGGCCTCGGCCCTGGGCGAGTTCATCGAGCGGCTGAACTGCAACTTCTTCTACAACG ACCAGTTCTGGGGCGAGGACATCGCCAACGCGCCCTTCGTCCACTACCCCGACGAGCGCTGGTTCAAGCCCAGCCGCCAGGACGAGCTGCCGGCGGAAAT CCTCGACGCCCACTGCCTGGCGATCTACAACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACACCAACTCGGGCAACGTGCAGCGCGGCATCTGC TCGCTGCCGTTCGTGCGCCAGTCCGACGGCAAGGTGGTGTACTTCCCCTCCAACCTGATCGAGAACCTGTACCTGAGCAACGGCATGAGCGCCGGCAACA CCCTGGCCGAAGCCCAGGTGCAATGCCTGTCGGAAATCTTCGAGCGCGCGGTGAAGCGCGAAATCCTCGAAAACGAACTGGCGCTGCCGGACGTGCCGCA GGAAGTGCTGGCCAAGTACCCCGGCATCCTCGCCGGCATCCGCGGCCTGGAGGAACAGGGCTTCCCGGTGCTGGTCAAGGACGCCTCCCTGGGCGGCCGC TTCCCGGTGATGTGCGTGACCCTGATGAACCCGCGCACCGGCGGCGTGTTCGCCTCCTTCGGCGCCCACCCCAGCCTGGAGGTGGCGCTGGAGCGCAGCC TCACCGAACTGCTCCAGGGCCGCAGCTTCGAAGGCCTGAACGACCTGCCGCAACCCACCTTCGAAAGCCAGGCGCTGACCGAGCCGAACAACTTCGTCGA GCACTTCATCGACTCCAGCGGCGTGGTGTCGTGGCGCTTCTTCAGCGCCAGGGCCGACTTCGAATTCGTCGAGTGGGACTTCTCCGGCCGGCGCGGCTCC AGTGAAAGAAAAGAGTCCAACGCCGAGGAAGCCGCCACCCTGTTCGGCATCCTCGAAGACCTGGGCAAGGAAGCGTACATGGCGGTGTACGAGCACCTGG GCGCAACGGCCTGCCGCATCCTGGTGCCCGGTTACTCGGAGATCTACCCGGTGGAGGACCTGGTCTGGGACAACACCAACAAGGCGCTGGCCTTCCGCGA GGACATCCTCAATCTGCACCGCCTGGACGACGCGCGGCTGGAGGCCCTGCTCGAGCGCCTGGAGAACTGCGAGGTCGACGACTACACCGACATCACCACG CTGATCGGCGTGGAGTTCGACGACAACACGGTCTGGGGCCAACTGACCATTCTCGAACTGAAGCTGCTGATCAACCTCGCCCTGCGGCGCTTCGAAGAGG CCAAGGAACTGGTGGAGGCCTTCCTCCAGTACAACGACAACACGGTCGAGCGCGGCCTGTTCTACCAGGCCCTGAACGTGGTGCTGGAGGTGGTGCTGGA CGACGAACTGGAGATCGCCGACTACGAAGCCAACTTCCGCCGCATGTTCGGCAACGAGCGGATGGACGCGGCGCTGGGCTCGGTGGACGGCAGCGTGCGC TTCCACGGCCTGACGCCGACCAGCATGAAACTGGAGGGGCTGGACAGGCACCTGCGGCTGATCGACAGCTACAAGAAACTGCACGCGGCGCGCGCCAGGC TGCAGCCCGCGCAGGACAGCGCCGCCGACACGGGAAGCGGCCTCAAGCCGCGGCGCGTGGCGATTCGCAAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGATGGGGCTGCGCCGAGGGGTTCTTCGTAGGATGGGTTGAGCTTGCGATCCCCATGGGATCCCGGTGATGGGTATCGCTGCGCTCAACCCATCCTACGG GTGCGGTGTCGGGCGCCCCGGCGGCACGGCCGACGGTCCGGAAGTATCAGGACAACTCCAGATTTCCCGGCGACTCGGGACGGCCCCCTCTCCCGCTTGC GGGAGAGGGCTGGGGAGAGGGCGCTCTTCGCAGGAGCGAGCAGCAGACCCAGCCGGTCAATACCTCCGATGGCGAAAACCCTCCGGCGCCGAACATTGAC CGAGGTCAATCCTTCTCCGGCCGACGCCATTAGATTCCACAACATCTTGTTGTCTTGAAAATTCAAAACACATCATGTTGTGGAATCCAGTCCAATGACC CAGACCCGGAACGTCCCTCTCCCCACCCGCCTGCGCAAGCGCAACGGCGCCGCCGCCCCCTTCGACCCGAGCAAGATCGAACGCGCCATCGCCGCCGCCG
Amino Acid Sequence
>OsmC-like protein
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYKQIFKIQVELPADISEK DRQGILRSIERCTVKKVVQTGPEFVIEEVENLDADAQALLMPSADADSRTYIAGKDLPLEQTIANMSAILAGLGMKIEIASWRNIVPNAWSLHIRDAQSP MCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGEDIANAPFVHYPDERWFKPSRQDELPAEILDAHCLAIYNPDGELRGSHLYDTNSGNVQRGIC SLPFVRQSDGKVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILENELALPDVPQEVLAKYPGILAGIRGLEEQGFPVLVKDASLGGR FPVMCVTLMNPRTGGVFASFGAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFESQALTEPNNFVEHFIDSSGVVSWRFFSARADFEFVEWDFSGRRGS SERKESNAEEAATLFGILEDLGKEAYMAVYEHLGATACRILVPGYSEIYPVEDLVWDNTNKALAFREDILNLHRLDDARLEALLERLENCEVDDYTDITT LIGVEFDDNTVWGQLTILELKLLINLALRRFEEAKELVEAFLQYNDNTVERGLFYQALNVVLEVVLDDELEIADYEANFRRMFGNERMDAALGSVDGSVR FHGLTPTSMKLEGLDRHLRLIDSYKKLHAARARLQPAQDSAADTGSGLKPRRVAIRKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site