Pseudomonas sp. M1, PM1_RS12105

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.300.20	-	IPR015946	K homology domain-like, alpha/beta	2	129	1.3E-16
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	735	758	-
SUPERFAMILY	SSF82784	OsmC-like	IPR036102	OsmC/Ohr superfamily	1	127	2.09E-20
Pfam	PF02566	OsmC-like protein	IPR003718	OsmC/Ohr family	32	126	3.6E-8
NCBIfam	NF040716	NCBIFAM: 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	-	-	150	728	0.0
Pfam	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding	IPR003776	YcaO-like domain	205	545	4.0E-73
NCBIfam	TIGR03549	JCVI: OsmC domain/YcaO domain-containing protein	IPR019938	YcaO domain protein	2	732	0.0
Gene3D	G3DSA:3.30.1330.230	-	-	-	306	416	7.6E-9
PANTHER	PTHR39624	PROTEIN INVOLVED IN RIMO-MEDIATED BETA-METHYLTHIOLATION OF RIBOSOMAL PROTEIN S12 YCAO	-	-	1	732	0.0
NCBIfam	TIGR00702	JCVI: YcaO-type kinase domain	IPR003776	YcaO-like domain	159	555	5.3E-90
Pfam	PF18381	YcaO cyclodehydratase C-terminal domain	IPR041080	YcaO cyclodehydratase, C-terminal	562	733	8.4E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.