Pseudomonas sp. M1, PM1_RS01765
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGGGGCAGGAACGCCTCCAGCTTGTCGCAGCGTAGGAAGCTCTGCAGCGCCGTACCGGTACGCCGGTTGAAGCCCTTGCCGCAGTGCCGGCAATTGAA ATAGGGAATGCCGTTCGGTGGCCTGCCCCGGTAGCGCAACACCACCTGGTGGCTGCCGCAGTGATGGCAGGGCGGCGGTGTTGGGTCCTTGGACAGGACT TCGTCGATGTGCCGTTGCAGGAAGGCGGTCAGTGCGGGGTCTTCGTGCCGGGGGATGTCCTGGCCACGGTCGAGAATGGGCAAGGCGTGGTCGAGTTGGC GGCGGGGCATGGGGCGGGCTTTGCGTGACATCGGAGCGCTATTTGAGCTGCGGCGCCGGGGCCTTGTGAATGTGCTCCGTGGGTGACTGGGCATAGTTCG GAAAAGGCCTACGCAAGGAGGCTGGAACTCCTCAAGGCCTCACGCTGAGTAGGGGAATAGAGTCCGCCGGGTCAACGATTACCCCGCGCGAGCCCCCGAT
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| DNA Sequence for Gene |
>PM1_RS01765
ATGGACATCCGTCGCCCCTTCTATCAGGCCATCGCCAGCGCCCTGGCCGGCCTGCTATTCCTCAACCCCATAGTCGCGACCGCCGCGCAACTGGCGGTGG ATGCGGCCGCCGGTGGCAACACCAGCCTGGGCGCGGCGGGCAACGGCGTGCCCATCGTCAACATCGCCACGCCCAACGGCAACGGCCTCTCGCACAATAA ATTCAGCGACTACAACATCGGCCAGCAGGGCCTGATCCTCAACAACGCCACCGGCAAGACCGCCAGCACCCAACTGGGCGGGATCATCATTGGCAACCCC AACCTCAAGGGCCAGGCGGCGCAGAAGATCCTCAACGAAGTCACCGGGGCCAGTCCCTCGCAGCTCAAGGGCTACACCGAAGTGGCCGGGCAGGGCGCCC ACGTCATAGTCGCGAACCCCCACGGCATCACCTGCAACGGCTGCGGCTTCATCAATACCCCGCGCGCCACCCTCAGCACCGGCAAGCCGATCCTGGCCGG CGAACGCCTGCAAGGCTACGACGTGGACGGCGGCGAGATCGCCATCGAAGGCGCCGGGCTCAACGCCAGCAACCTCGACCAGTTCGAACTGATCACCCGC AGCGCCAAGCTCAACGCCGACCTGTACGCCAAGCAGCTCACCGTGGTGGCCGGCCGCAACACGGTGGATGCGGAAAGTCTCGCCGCCACCGCCAAGCCCG ACGACGGCAGCGCCAAACCGCAACTGGCCATCGACAGCTCCGCCCTGGGCGGCATGTACGCCAACACCATCCGCCTGGTCGGCACTGAACAAGGCGTGGG CGTGAAACTGGCCGGCAACATGGCGGCCAGCGCCGGTGACATCCGCATCGATGCCAACGGCAAGCTGCAGCTGGCCCAGGCTTCGGCCAGCGGGAACCTG GCGCTGAAAGGGCAGGACGTGGCGCTGAACGGCCCGGCCTATGCCGGGGGCAGTGCCAGCGTGCAGGCCAGCGGTGCGCTGAGCAATGCGCAGAGCCTGG CGGCGGGCTCGACCCTCGAACTGAAGGCCAACCAGCTCAGCAACAGCGGCGTGATCGAGGCCGGCGTCAATGCCGACAACAGCCGCAACGCCCGCGGCGA CGTGGCCATCGATGCGCAGAACCTGCGCAACAGCGGCAGCCTGATCGCCACGCGCCAGCTGCAGGCCCGCGCCGCCGTGCTCGACAATCGCAACGGCCAG ATTGGCGGCCAGCACATCCATATCAGCGGCGGCGCCCTGGACAACCGCCTCGGCCTGTTCGCCGCCGAACAGAGCCTGCGCCTGGACCTGGCCAGCCTGG ACAACAGCGGCCAGGGCACCCTCACCAGCCGCGGCACCCTGCACGCCAACCTCGCCGGCAAGCTGGACAACAGCGCCGACGGCCTCATCCACAGCGCCGG CAACCTCACGCTGGCTGCGCAGCACATCGACAGCAGCCGGGGCGAAATCTCCACCCAGGCCGATGCCGACATCCGCACCCGGCAACTGAGCCTGCGCGGC GGGCGCCTGCTGGGCAACGGCGCGCTCGGCCTCGACCTGCAGGGCGGCGACCTGGACAACAGCCAGGGCGGGCTGCTCAGCGCCGGCGCCCTGAGTTTCA AGCAACTGGGCGCGGTGGATAACCGTGACGGCGAAATCTCCAGCCAGCAGAGCTTCGCCCTCGGCGCCCGGCTGCTGGACAACCGCGACAGCGGCCGCAT CATCAGCGCCGGACGGCTCGACCTGCAGGCCGACCGGCTGCTCAACGCCGGCCTGGGCCTGCTGTCCGGCTGGCAGGGGCTGAGCGTCGGCGGCGGCAGC CTGGACAACAGCCAGGGCGGCACCCTCTCCAGCAAGGCCGGCGCGCTCGCCGTCAGCCTCGCCGGCGCACTGAACAACGCCAGCCAGGGCGCCCTGGTCA GCCAGGGGGACCAGCGGATCAGCGCGGCCAGCCTGGACAACCGCGGCGGCATCGTCTCCGCCGAGGGCAACGTCGAACTCGCCATCGCCGACACCCTCGA CAACCGCGACGCCGGCCTGATCGACGCCCAGCGCCGGCTCGACTTCAGCCACGCCGCCACCCGGCTGCTCAACCAGGGTGGGCAGATCAGCGCCGGCAGC CTGCTGCTCAAGGGCCGCAGCCTGGACAACAGCGGTGGCCAACTGCTCAGCCAGGGGGCCCTGGAGGCGACGCTGAGCGGCGCGCTCATCAACGCCAACA ACGCCCGCCTGAGTAGCGGCGCCGGCCTGCTGCTCAAGGCCGCCAGCCTGGACAACCGTGGCGGCCAGCTGTCCAGCCAGTCCACCCTCGAGCTGATCCT CGGCCAGGGCGGCCTGGACAACCGCGACCGCGGCACCCTGGCCAGCCAGGGCGCATTGCGCATCGAGGCGCTCGACGGCCGCCTGCTCAACGGCAACGAC GGCCTCGTCCACAGCGGCGACAGCCTCAGCCTGCGCGCCGCCGGCCTCGACAACCAGCAGGGGCAGGTTTCCAGCCAGGGCGACGCCAGCCTCGCCCTGA GCGGTGCGCTGAACAATGCCCGGGGCCGCATCCAGAGCGACGGCGGCAGGCTCGACCTGGGCGCCGCGAGCACCGACAACAGCGGCGGCATCCTCAATGC CGCCCAGGGCCTGCTCCGGATCGTCACCGGCTACTTCGGCAACGACGCCGGCGTGGCCCAGGGCGTGGACCTGGACGCCCAGGCCAGCGGCGGCATCGGC AACCGCCAGGGGCATCTCGCCGCCACCGCCGGCCAGGCCAAGGTCGACAGCGGCAGCGCAGCCCTGGACAACCGCGACGGTGGTCTCTACGCCGGCAACC AGCTGACCCTCGCCGCCGGCGACTTCCTCAACGGCAACGGCAAGGTCGGCGCGAAAGGCATCGACTTCAGCCTGCGGGGCGCCCTGAACAACGACGGCGG CCTGATCGAAGCCGGCGACTGGCTGAGCCTCGACGCCGCCAGCCTGAGCAACGCCCAGGGCCGCCTGCGCGCCCTGGGCCAGGGTGGCAGCACGCGGATC GCCACCCGCGGCCTGCTGGACAATCGCCAGGGCACCCTGGAAACCGCCGCCGACACCCTGCAACTGAGCGGCGGCGCCCTGCACAACGCCGGCGGCACCG TGTTGCACGCCGGCAACGGCCAGTTCCTCGTCGACCTGGGGCAACTCGGCCAGGCCGGCGGCCACTTCATCACCCAGGCCGCGCTGGACATCGACGCGCC GGACTGGACCCTGAACAGCAGCCTGCAGGCCCGCCAGCTCACCCTCAACGTCGACCGCCTGCAGCTCGGCAGCGACGGCCAGCTGCTGGCCGTGCAGGGC CTTGACGGCAGCGGCAGCCACTGGCGCAACGACGGGCTGATCGCCAGCGATGCCGGCCTGAGCCTGAACCTGAGCGGCACCTACGCTGGCGCCGGGCGCC TCACCAGCCTGGGCGACCTGAGCCTTGGGGCGAGGCGGATCGAACTCGGCGCCGCCGCCAGCATCGCCGGCGGCAGCGCGGCCAGCGTCACCGCCAGCGG CCTGAGCAACCACGGCCGCATCAGCTCCGCCGGCGACCTCGGCGTGCGCGTCGCCAGTCTCGACAACTTCGGCAGCCTCGGCAGCGCCGCCGGGCTGCGC GTGGAGGCCGGCAACCTGCTCAACCAGGGCGGGCTGCTGTTCAGCGGCGGCGACATGGCGTTGCGGGTCGGCACCCTCAGCAACCGTGCCGGCGACCTCT ACAGCCTCGGCAACCTGCACATCGCCGCCAACGACCAGGACGGCTGGGCGGCCAAGGTCGAGAACGTCTCCGGCAGCATCGAAAGCGCCGGCGCCCTGAC CCTGCTGGCGCAGGACTTCGACAACCGCCGTGGCGACGACTTCCGCATCGGCCAGCGCATCGTCGCCGGCAACATCCGCATGTACGCCGACGATGTGTGC GACGGCAAGGGCTGCGAATTCCGCTTCCAGTCCTGGGAGCGCTACGAGGACGTCATCACCCAGGACTCGCCCCAGGCGACGATCACCGCCGGCGGCGACT TCGTCTTCCGCGGCGGCGCCTTCGCCAACCTCTACAGCAGCATCGCCTCGGGCGGCGACATCGACATCCAGGCCACCCGCTTCCGCAACCAGGGCGCGGC CGGCGGCGTGGAGCGGCACCTGGACGGGGCCTTCTACACTCGCACCGACGCCTACTACTGGACGTTCCGCAGCAACCAGGCGCTCTACAACCGCTACAAC GACCCCAACTCGCCGGACTACGACCCCGGCGCCCTGAGCCGCCAGCAGGTGCTGGAGTCCGGCGGCTACCCGGAACACAACTTCCACAACCTCATGATCT CCGAGGTGCAGGTGTCCGGCGCCCCGGCGGCCAGCGCGGTGATCCAGGCCGCAGGCAACGTCAGCATCATCGCCAGCGAGCAATTCGACAACAGCGTGGT GCGCCGCGACGCCGGCGCCCAGAGCATCGACCCGCGCGACGTGAGCACGGCCACCGGCGCCGCCACCGGCCAGTTCGCCATCACCTCGCAGCTGCCGCCG GACCTGGCGCAGCAGCAGGTCAACCCACTGGAGCTTCCCGGCTTCAGCCTGCCCAGCGGCGGCAACGGCCTGTTCCGCTTGAGCGGCGAGGACGGCAGCG CCGGCGCCGGGAACGGGCCCGATCTCGCCGGCCTCGGCCAGGGGCTTTCCCGCGTCCAGGGCGTGCCGGGCAGCGCCGCGCCGGACAACAGCCACAAGTA CCTGATCGAGACCAACCCGGAGCTGACCCGCCTGAAGAGCTTCCTCAGTTCCGACTACCTGCTGGGCCTGCTCGGCTACGACCCGGACCAGGCGCAGAAG CGCCTGGGCGACGGCCTCTACGAACAGCGCCTGATCCAGCAGGCGGTGGTGGCCCGCACCGGCCAGCGCTTCATCGACGGCATGGCCAGCGACGAGGCGC TGTTCAAGTACCTGATGGACAATGCCATCGCCTACAAGGACAGCCTCAAGCTGACGGTAGGCGTGGGCCTCACCGCCGAACAGGTGGCGGCGCTGACCCA CGACATCGTCTGGCTGGAAGAGGCCGTGGTGAACGGCGAGAAGGTACTGGTGCCGGTGCTCTACCTGGCCCAGGCCGACAACCGCCTGGCGCCCAACGGT GCCCTGATCCAGGGCCAGGATGTGAGCCTGATCAGCGGCGGCGAACTGAACAACGCCGGCACCCTGCGCGCCAGCGGCGACCTTAGCGCCACCGCGGCGA ACATCGGCAACAGCGGCCTGATCGAAGCGGGCAAGCGCCTCGACCTGCTGGCCACCGAGAGCATCCGCAACACCGCCGGCGGCATCCTCAAGGGGCGCGA CGTCAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCATCACCACCCTCGACCTGAGCGCCGGCAACGACCGCATCCACAAGGAAATCGCC AACGCCGCCGCCCGCATCGAAGCCAGCGGCAACCTGGCGATCAACGCCGGGCGCGACCTGCTCAGCGTCGGCAGCGCGATCCAGGCCGGCGGCGACGCCC ACCTGCAGGCCGGGCGCGACCTGCGCCTGGAGGCTGCCGGGGAAACCGACAGCGCCGATTTCCAGAGCCGGCGCATGCAGGGCAGCCTCGCCAGCACCAC CCAGCACGCCAGCGAAATCAGCGTCGGCGGCAACCTCGATGCCAGCGCCGGCCGCGACCTCAGTGTCATCGCCAGCGACATCGACGCCAAGGGCGACATC GCCCTGGGCGCCGGCCGCGACGTCACCCTCGCCTCGGCGGCGAACGAAGACCACAGCCAGACGAAGTACAAGGGCGGCGGCAAGAAGGTCGAGCAGCAGG ACGACCAGGTGCGGCAGCAGGGCAGCAGCCTGAGCGCGGGCGGGGACGTGGTCGTCAGCGCGGGGCAGAACCTCACCCTGGTGGCCAGCCAGATCAGCGC GGGCAACGAAGCCTACCTGGTGGCCGGCGACAAACTGGAACTGCTGGCGGACTACGACAGCGACTACTCCCTGTACAGCGAGGAGAAAAAGGGCGGCTTC GGCAGCAAGAAGACCCAGCGCGACGAAGTCACCGACGTGAAGGCGGTGGGCAGCCAGATCAGCGCCGGCTCCGACATCACCCTGCTCAGCGGCGGCGACC AGAAATACCAGGGCGCGAAGCTCGAAAGCGGCAACGACATCGCCATCCTCAGCGGCGGCAGCGTGACCTTCGAAGCGGTCAAGGACCTGCACCAGGAAAG CCACGAAAAGAGCAAGGGCAACCTCGCCTGGCAGTCCGCCAAGGGCAAGGGCCAGACCGACGAAACCCTGCGCCAGAGCCAGCTGATCGCCCAGGGCGAA CTGGCGATCAAGGCCGTGGAAGGCCTGAAGATCGACATCAAGCACATCGACCAGCAGAGCGTCGGGCAGACCATCGACGCCATGGTGCAGGCCGATCCGA ATCTGGCCTGGTTGAAGGAAGCCGAACAGCGCGGGGACGTGGATTGGAACCGCGTCAAGGAGGTGCATGACTCCTTCAGCTACAGCAGCTCGGGGTTGGG CGTAGGGGCGCAACTGGCCATCGCCATCGTGATGGCCGCCTACGTCGGGCCGGCCGCCCTGAAAGCCATGGGCGGCGGCGCCGTCGCCGCCGGTGGCGCG GCCATTGCCTCGGGGGCCGCGACCAACGCCTCGATCAGTCTGGTGAACAACCGCGGCGACCTCGGCGCGGTCTGGCAGGACACCACCTCAAGCGATGCCC TCAAGGGCTACGCCATCTCCGGCATCACCGCCGGTCTGACCCAGGGCTACTTCAACGATTGGACCGGCGCCCCCAGCGACATCACCGGCAAAATCACCAT CGACCTGGGCTCCCTCAAGGGCATCGGCCAATTCGCCGCCAGCCAAGGGCTGCAGAACGGCACGGCATTGGCGCTGGGCCGGATCATGGGGCAGGGCGGC GACCTGGGCGATGCCCTGCAGAGCACCCTGCTCAACACCCTGGCCGCCGTCAGCTTCAACGCCGTGGGCGACTACACGAAGGGCGTCTACGCCGACGGCA GCATCCAGAAGGTGATGATCCACGCCATGGTCGGCGGCCTGCTGGCCGAGGCCAGCGGCGGCGACTTCAAGACCGGCGCCCTGGCGGCGGGTGCCAACGA AGCCCTGGTGGACCAGCTCGACACCTGGGTGGGCGGCGACAAGGTCCTGCTCGACATGACCTCCCAACTGGTCGGCCTGCTGGCGGCCTCGACCCTGGAC GGCGCCGATGCGCAAAGCCTGCAGACCGGGGCCTGGGTGGCGCAGAACGCTACGCAGTACAACTACCTGAATCACCTGGAGAACCAGGAGCGCTGGGAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAAGCAAGCCTGCGATGGCGGTGATTCCGATGCCTGCGGGAAGGTCGATGAGCTGAACAAGCTGGATCGTGACCGGGACTTGGCTCTTCAAACGGCCT GTTCATCGGCGGCGACCAGCTTGGCATGTTCCCGCCTGCGCTCTGAGGCGTGGGAGGCTGCGCAGTCGTTGAAATGGGCTGGTCGTTCGCCGGAGGCGCA GGAGCAGTACCAGCAGGCAATGCAAAACCCGCAATTGATGGCTTACACCATCGAGAGCGAGTTGCGCAGCATCTATCGGATCAACGATCCGATTACCGCC GGTGACTCCAGGCGTCTGGCCGAGGCGATGGCCAAGTTTGGCTCGGAGTTCATTCCAGGTTACGGGGATGCTCAAGCATTTCTGGACGCGAAAGACCCCT TCGACTACCTGATGGCCGGGGTGAGCGTGGTCCCGGGGGCGGGGGACGCTGCCGCGCAAATCCTGGGGAAGGCAAAGAAGCTCTATCAGGAAGGTAAGGT
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| Amino Acid Sequence |
>hypothetical protein
MDIRRPFYQAIASALAGLLFLNPIVATAAQLAVDAAAGGNTSLGAAGNGVPIVNIATPNGNGLSHNKFSDYNIGQQGLILNNATGKTASTQLGGIIIGNP NLKGQAAQKILNEVTGASPSQLKGYTEVAGQGAHVIVANPHGITCNGCGFINTPRATLSTGKPILAGERLQGYDVDGGEIAIEGAGLNASNLDQFELITR SAKLNADLYAKQLTVVAGRNTVDAESLAATAKPDDGSAKPQLAIDSSALGGMYANTIRLVGTEQGVGVKLAGNMAASAGDIRIDANGKLQLAQASASGNL ALKGQDVALNGPAYAGGSASVQASGALSNAQSLAAGSTLELKANQLSNSGVIEAGVNADNSRNARGDVAIDAQNLRNSGSLIATRQLQARAAVLDNRNGQ IGGQHIHISGGALDNRLGLFAAEQSLRLDLASLDNSGQGTLTSRGTLHANLAGKLDNSADGLIHSAGNLTLAAQHIDSSRGEISTQADADIRTRQLSLRG GRLLGNGALGLDLQGGDLDNSQGGLLSAGALSFKQLGAVDNRDGEISSQQSFALGARLLDNRDSGRIISAGRLDLQADRLLNAGLGLLSGWQGLSVGGGS LDNSQGGTLSSKAGALAVSLAGALNNASQGALVSQGDQRISAASLDNRGGIVSAEGNVELAIADTLDNRDAGLIDAQRRLDFSHAATRLLNQGGQISAGS LLLKGRSLDNSGGQLLSQGALEATLSGALINANNARLSSGAGLLLKAASLDNRGGQLSSQSTLELILGQGGLDNRDRGTLASQGALRIEALDGRLLNGND GLVHSGDSLSLRAAGLDNQQGQVSSQGDASLALSGALNNARGRIQSDGGRLDLGAASTDNSGGILNAAQGLLRIVTGYFGNDAGVAQGVDLDAQASGGIG NRQGHLAATAGQAKVDSGSAALDNRDGGLYAGNQLTLAAGDFLNGNGKVGAKGIDFSLRGALNNDGGLIEAGDWLSLDAASLSNAQGRLRALGQGGSTRI ATRGLLDNRQGTLETAADTLQLSGGALHNAGGTVLHAGNGQFLVDLGQLGQAGGHFITQAALDIDAPDWTLNSSLQARQLTLNVDRLQLGSDGQLLAVQG LDGSGSHWRNDGLIASDAGLSLNLSGTYAGAGRLTSLGDLSLGARRIELGAAASIAGGSAASVTASGLSNHGRISSAGDLGVRVASLDNFGSLGSAAGLR VEAGNLLNQGGLLFSGGDMALRVGTLSNRAGDLYSLGNLHIAANDQDGWAAKVENVSGSIESAGALTLLAQDFDNRRGDDFRIGQRIVAGNIRMYADDVC DGKGCEFRFQSWERYEDVITQDSPQATITAGGDFVFRGGAFANLYSSIASGGDIDIQATRFRNQGAAGGVERHLDGAFYTRTDAYYWTFRSNQALYNRYN DPNSPDYDPGALSRQQVLESGGYPEHNFHNLMISEVQVSGAPAASAVIQAAGNVSIIASEQFDNSVVRRDAGAQSIDPRDVSTATGAATGQFAITSQLPP DLAQQQVNPLELPGFSLPSGGNGLFRLSGEDGSAGAGNGPDLAGLGQGLSRVQGVPGSAAPDNSHKYLIETNPELTRLKSFLSSDYLLGLLGYDPDQAQK RLGDGLYEQRLIQQAVVARTGQRFIDGMASDEALFKYLMDNAIAYKDSLKLTVGVGLTAEQVAALTHDIVWLEEAVVNGEKVLVPVLYLAQADNRLAPNG ALIQGQDVSLISGGELNNAGTLRASGDLSATAANIGNSGLIEAGKRLDLLATESIRNTAGGILKGRDVSLTALTGDVINERSITTLDLSAGNDRIHKEIA NAAARIEASGNLAINAGRDLLSVGSAIQAGGDAHLQAGRDLRLEAAGETDSADFQSRRMQGSLASTTQHASEISVGGNLDASAGRDLSVIASDIDAKGDI ALGAGRDVTLASAANEDHSQTKYKGGGKKVEQQDDQVRQQGSSLSAGGDVVVSAGQNLTLVASQISAGNEAYLVAGDKLELLADYDSDYSLYSEEKKGGF GSKKTQRDEVTDVKAVGSQISAGSDITLLSGGDQKYQGAKLESGNDIAILSGGSVTFEAVKDLHQESHEKSKGNLAWQSAKGKGQTDETLRQSQLIAQGE LAIKAVEGLKIDIKHIDQQSVGQTIDAMVQADPNLAWLKEAEQRGDVDWNRVKEVHDSFSYSSSGLGVGAQLAIAIVMAAYVGPAALKAMGGGAVAAGGA AIASGAATNASISLVNNRGDLGAVWQDTTSSDALKGYAISGITAGLTQGYFNDWTGAPSDITGKITIDLGSLKGIGQFAASQGLQNGTALALGRIMGQGG DLGDALQSTLLNTLAAVSFNAVGDYTKGVYADGSIQKVMIHAMVGGLLAEASGGDFKTGALAAGANEALVDQLDTWVGGDKVLLDMTSQLVGLLAASTLD GADAQSLQTGAWVAQNATQYNYLNHLENQERWE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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