Pseudomonas sp. M1, PM1_RS01765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 755 797 0.99
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 955 986 9.9E-4
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 2191 2223 57.0
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1191 1230 3.9E-6
Pfam PF04830 Possible hemagglutinin (DUF637) IPR006915 Domain of unknown function DUF637, haemagglutinin putative 2199 2363 9.1E-24
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 379 416 8.1E-5
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 927 953 6.3
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 501 542 0.037
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1078 1142 72.0
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 65 163 2.3E-19
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 461 496 0.016
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 45 314 8.47E-64
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 801 840 2.4E-6
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 29 291 7.3E-60
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 35 327 1.8E-102
MobiDBLite mobidb-lite consensus disorder prediction - - 1921 1935 -
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 613 681 0.008
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 298 360 6.6
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1436 1465 130.0
MobiDBLite mobidb-lite consensus disorder prediction - - 1913 1946 -
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1326 1365 29.0
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 586 627 1.5
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1926 2072 2.3E-10
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 672 712 6.2E-6
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 544 584 4.3E-5
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1862 1922 1.6E-7
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 781 848 0.005
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1720 1759 0.56
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 1176 1267 1.6E-4
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 737 775 0.004
Coils Coil Coil - - 2431 2433 -
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 630 669 2.3E-8
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 418 459 8.8E-4
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 409 458 0.077
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 1154 1189 0.11
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1704 1853 0.002
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 47 168 3.5E-46
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 713 754 0.037
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 995 1031 0.077

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.