Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGCTCACGGTCTGTCGGCAGCGGCACTCTTTATCCTGTGCGGCCAGTTGTACGAACGCACCCACACCCGCGACATGCGTGAAATGGGTGGCCTGTGG TCGAAGATCGCCTACCTGCCAGCCATCAGCCTGTTCTTCGCAGCAGCCTCGCTGGGCTTGCCGGCGACCGGTAACTTCGTCGGCGAATTCCTGATCCTGA TCGGTACCTTCGCCAGCGCGCCATGGGTCACCGTGCTCGCGACTTCCGGCCTGGTGTTCGGTTCGGTCTATTCGCTGATCATGATTCACCGCGCCTACTT CGGCCCCGCCAAGTCGGACGCGGTCCTGCACGGCATGGACGCTCGCGAACTGATCATGGTGGTCGGCCTGGCGGCGCTGCTGATCTACATCGGCATCTAC CCGCAACCGTTCCTCGATACCTCTGCCGCCACGATGAGTGGCGTGCAGCAATGGCTCGGCACCGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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DNA Sequence for Gene |
>EY04_RS19155
ATGGACTTTACGATTCAACACTTTATCGCGCTTGCGCCGCTGTTGATCACCAGCCTCACCATCATTGTGGTGATGCTGGCTATCGCCTGGCGTCGCAACC ATTCGCAAACCTTCCTGCTGTCGGTCGCCGGTCTGAACCTGGCGTTGCTGTCGATCCTGCCGGCCCTGAAAGTCACCCCTCTGGCGGTGACTCCATTGCT GCAGATCGACCAGTTCGCCTGCCTGTACATGGCGCTGATCCTGGTGGCCACCCTGGCCTGCGTCACCCTCGCCCACGCCTACCTGGGCGACGGCGGCACC GGCTACCCGGGCAACCGCGAAGAGCTGTACCTGCTGATCCTGATGGCCGCCGCCGGTGGCCTGGTCCTGGTCAGCGCGCAACACCTGGCCGGCTTGTTCA TCGGCCTGGAGCTGCTCTCGGTACCGGTCTACGGCCTGGTGGCTTATGCCTTCTTCAACAAGCGTTCGCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCCGCCGGTTCCGCGTTCCTGCTGTTCGGCATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCAACGGCATCGGTCAGGCCCTGGCCGCGACC GGCCTGCCTAGCCCGCTGGCCCAACTGGGCCTGGGCATGATGCTGATCGGCCTGGCGTTCAAGCTGTCGCTGGTGCCCTTCCACCTGTGGACCCCGGACG TCTACGAAGGGGCTCCGGCGCCTGTGGCGGCCTTCCTGGCCACCGCGAGCAAGGTGGCGGTGTTCGCGGTGATGGTGCGTCTGTTCCAGATCTCGCCGGT AGCCAGCAGCGGTGTCCTGAACACCGTGCTGACCCTGATCGCGATTGCCTCGATCCTGTTCGGTAACCTGCTGGCGCTGACCCAGAGCAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCCCACTTCGGTTACCTGCTGATCGCCCTGGTGGCGAGCAAGGGCCTGGCGATGGAAGCCATCGGCGTCTACCTGGTCA CCTACGTGATCACCAGCCTCGGCGCCTTCGGCGTGATCACCCTGATGTCCTCGCCTTACAAGGGTCGCGATGCGGATGCCCTGTACGAGTACCGCGGCCT GTTCTGGCGTCGTCCGTACCTGACCGCGGTACTGACCGTGATGATGCTGTCCCTGGCCGGTATCCCGCTGACCGCGGGCTTCATTGGCAAGTTCTACATC ATCGCCACCGGTGTCGAAGCGCACCAATGGTGGCTGGTCGGTTCCCTGGTCCTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGCGTCATGGTCACCC TGTACCTGATCGAGCCGAACCTGCGCCGCGTCGACGCCCAGCTGCACTGGGAACAGAAAGCCGGCGGCGTGATGCTGCTGGCCATCGCGGTCCTGGCGTT CTTCCTCGGCGTCTACCCACAACCGCTGCTGATCCTGGTCCAGCAATCCGGTCTGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCTCAAGAACGATCCGCAGCAAAACAAGACGGCGCCTTCGGGCGCCGTTTTGTTTTCCGAAGAAAAACCGCCCTGCCCTTCCTCCTGCCACCTGAAAG GAATTGCCTTTCAGGCTTTAAAGACGCGTCCTACGTCTCATCCTGATTGCCAAGTCTAAGGTCATTAAAAGGCGACGAGCGCCATGCGCAACGCCTTGAC CTCTCGACCCATTCAACCAAAAATATACGCAGATCACGTACAGATCATGGGCGCACTTTTTATTGAGCTGCCCCCGTTCCAACGCCATCGACAGGACTAC CTGGACGACGAGCTTTTTCGTAATTTGCAGCTTGAGTTGCTGAAAGCCCCCGAAGCCGGAGATCTCATCGAGAGAACCGATGGCTTGCGCAAGATCCGCT TTGTCGATGAGCGACGGCACAAGGGCAAACGCGGCGGGATCCGGGTGATTTATTACTGGTGGTCCGGAGACGCCCAATTCTGGCTCTTCACCCTTTACGC
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Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MDFTIQHFIALAPLLITSLTIIVVMLAIAWRRNHSQTFLLSVAGLNLALLSILPALKVTPLAVTPLLQIDQFACLYMALILVATLACVTLAHAYLGDGGT GYPGNREELYLLILMAAAGGLVLVSAQHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFNGIGQALAAT GLPSPLAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPVASSGVLNTVLTLIAIASILFGNLLALTQSNLKR LLGYSSIAHFGYLLIALVASKGLAMEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVEAHQWWLVGSLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAQLHWEQKAGGVMLLAIAVLAFFLGVYPQPLLILVQQSGLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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