Pseudomonas chlororaphis PA23, EY04_RS19155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042773 ATP synthesis coupled electron transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00445
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008137 NADH dehydrogenase (ubiquinone) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00445
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pch01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pch00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature - - 309 321 6.0E-5
PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature - - 217 238 6.0E-5
PANTHER PTHR22773 NADH DEHYDROGENASE - - 20 481 3.6E-98
Pfam PF00361 Proton-conducting membrane transporter IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit 126 422 2.1E-79
PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature - - 70 95 6.0E-5
Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 6 477 17.712084
PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature - - 416 435 6.0E-5
NCBIfam TIGR01770 JCVI: NADH-quinone oxidoreductase subunit NuoN IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 8 476 4.9E-126

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.