Strain | Pseudomonas chlororaphis strain PA23, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTTGGCGGTCGTTACTCCGATGACTGGCAGCGTGCGCACCTGTACAACCCGCGCAACGTTGTACCT GAGTCGAAAATGCCGGCTTACCCGTTCCTCGTAGAAAACAAGCTCGACGGCAAAGACACCGCGAAAAAAATGGAAGTCTTGCGCACGCTCGGCGTCCCTT ACACCGACGAAGACATCGCCGGTGCCAAGGATGCCGTGAAGGGCAAAACCGAAATGGACGCGCTGGTGGCCTATCTGCAAGGCCTGGGCACCATCATCAA AAGCAAACGGTGATCTGGATGGATATCGGGATGATTCGTGGCCTGGGCACCGTAGTGGTGATGGTGGCCTTCATCGGCCTGGCGCTGTGGGTGTTCAGCC CCAAGCGCAAGTCCGAGTTCGAAGACGCCACCTTGCTGCCGTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>EY04_RS09100
ATGACTACGTTCTGGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACCATTTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCGCCG AGCAGACCGACGAGACGGTCGGCCACTCCTTCGACGGGATCGAGGAGTACGACAACCCACTGCCGAAATGGTGGTTCATGTTGTTCGTCGGCACCATCGT CTTCGCCCTGGGTTACCTGGTGCTGTACCCGGGCCTGGGTAACTGGAAAGGCATCCTGCCAGGCTACAACTACCTGGATACCGAAAAGCAGACCCCCTTC GCCAACGGCCAGACCGGCTGGACCGGCGTGCACGAGTGGGAAAAGGAAATGGCCAAGTCGGACGCCAAGTTCGGTCCGATCTTCGCCAAGTTCGCCTCCA TGCCGATCGAGGAAGTCGCCAAGGACCCGCAAGCCCTGAAGATGGGTGGCCGCCTGTTCGCCTCCAACTGCTCGGTCTGCCACGGTTCCGACGCCAAGGG TGCCTATGGCTTCCCGAACCTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGGGCGGTCGTCACGCGGTGATG CCGGCCTGGGCGGAAGTCATCGGCGAGCAAGGCGTCAGCGATGTGGCCGCCTATGTGCTGACCAACCTCGATGGCCGCAAGCTGCCGGAAAGCGCCAAGG CCGATCCGGCCAACGGCCAGAAGATCTTCGCCGCCAACTGCGTGGCGTGCCACGGTCCGGCCGGTAAAGGTACCCCAGCCATGGGCGCACCTGACCTGAC CCATCCGGGCGCGTTCATCTACGGCTCGAGCTTCGCCCAACTGCAGCAGACCATCCGTTACGGCCGTCAGGGTCAGATGCCTGCCCAGGAACAGCTGCAA GGCAACGACAAGGTTCACCTGCTGGCCGCTTACGTCTACAGCCTGTCCCACAGTGACAAGTCGGCGGACGCCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCAGACACCTTCGGGTAACAGAAAAAGGCCCCGCCAATGTCCATTGGCGGGGCCTTTTTATTGGTTCTTCACGGAATTCCGGGAAACACAGAAACAAGA ACGCCGATTTGATTGATGATGTTCGTGCGAGCAAACACATCTAAAAAACCGGCGTTCTTATGCACGATATTAATACTTTCCTTCCTTTTTGGGAGGGCTT TTCTGTCGTCACGATCAAGCCTGATGGTGATGCCCTACAGATCGATCTGACGCCCCACACCACCCGATTCCCTTCCTGTGGTGGATGCCAAAAGCCCTGT TCAACCACTCACGAGTATTGCGAGCGAGTCGTTCGTGATTTGCCCATTCTCGGCCGTGCAGTGCGCCTCAGCGTTTTGCTCAGACGTGTTGGCTGTCGTG ACTGCGGCAAACGCATGGAGACTGTCAGTTGGCTGGATCGCTATGCCCGTATGACGCGCCGCTTGGCCGATGCGGTGATTCAAGCCTGCGAGCGCCTTCC
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Amino Acid Sequence |
>cytochrome Cbb3
MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRAEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLVLYPGLGNWKGILPGYNYLDTEKQTPF ANGQTGWTGVHEWEKEMAKSDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVM PAWAEVIGEQGVSDVAAYVLTNLDGRKLPESAKADPANGQKIFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQ GNDKVHLLAAYVYSLSHSDKSADAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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