Pseudomonas putida S12, RPPX_RS00865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S12, complete genome. [Details]
DNA Sequence Upstream of Gene
GTCGGTCAAGGACATCAAGCGCTGGAACCGTTTGTCCGGCAACAGTCTGCGTGCTGGCCAGGTTCTGGCCCTGCGCGGCGGCAGTGCACCGAGCGCCGCC GGCAACCGGGTTGCCGCCTCCGGGAAGCGCTCCACGCAATACAAGGTCCGCAAGGGCGACTCCCTGTACCTGGTGGCCAAGCGCTTCAATGTGGAAATGA AGCACCTCAAGCGTTGGAACCCACGCAGCGGCCATGCCCTCAAGCCAGGCCAGACCCTGACCGTCTACCTCGGGCATTGAGTCGTTACAGGGGCTGCTTT GCAGCCCATTCGCGGGCACGCCCGCTCCCACAGGTTTTTCACAGCCCTCAAAGCCGGTGCTGTACCTGTGGAAGCGGGCGTGCCCGCGAATAGGCCTGAA AACCCAGCCACTGGAAAACCCCAGCCCCTCTCTTTTTCCAACCCCACCAAGCTGTTACTGTACTCGATCAAAGCCCAACGCCTCTGGATCGGATGCCGAC
DNA Sequence for Gene
>RPPX_RS00865
TTGATACGTCCCCTCCTGCTGTCACTCAGCCTGGCCTTGAGCTTTCCCGCAGCCGCGATGGTGAGCGAAAGCCACGGATACGCGCAGTTCGGCACGCTCA AGTACCCAGCCACCTTCACCCACTTCGACTGGGTCAACCCGCAAGCGCCCAAGGGCGGCACGTTGCGGGCCATGGCTTTTGGTACCTTCGACACGCTCAA CCCCTACACCTTCAAAGGGTCGAGCCCGATTACCACGCCCAATTTCCAGCAGTACGGCATCAGCGAGCTGAACGAGCCACTGATGGTCGGCACGGGCCAG TACGACCCGTCCGGTGACGAGCCGACCTCCAGCTATGGCCTGATCGCCCGCTCGGTGGAGTACAGCGAGGACCGCAGCTGGGTGGTGTTCAACCTGCGCC CCGAAGCCCGCTGGCATGACGGCCAGCCCATCACCTCGGCTGACGTGGCCTTCTCGTACCGCACGCTGCTCAAGGATGGCCACCCGATCTACCGCACCAA CCTGCAGGAAGTGCAGCGGGTGGACATCCTCGGCCCGCTACGCATCCGCTTCGTGTTCAAACGCGCCGGCAACCCGCTGCTGATCCTGCGTCTGGGCGAA ATGCCGGTGCTGCCCAAACACTACTGGCAGAAGCGCGACTTCAAGGCCACCACCTTCGAGCCCCCCTTGGGCAGCGGGCCCTACCGCATCACCCAGGTAC AACCCGGACGACGCCTGGTGTTTGAACGGGTGAAGAACTACTGGGGCAAAGACCTGGCGGTCAACCGTGGCAAGTACAATTTCAATCGGGTCGAATACGA GTTCTATCGTGACGCGACGGTGGCCTTCGAAGCATTCAAGGCCGGCGAGTTCGACATCTATATCGAGCACCAGGCAAAAAACTGGGCCAACGGTTACAAC TTCCCTGCCGTGCGCCGGGGTGAAGTGATCAAGGCACAAATCCCGCACAGCATCCCCACGCAAACACAGGGCCTGTTCATGAACAGCCGCCGGGCCGCGT TCAGTGACCCGCGGGTACGCCAGGCGCTGGGGCTGATGCTGGACTTCGAGTGGACCAACCGCGCGCTGTTCAGCAGCGCCTACCGCCGCTCGACCAGCTA CTACCCCAACAGCGAGTTCGCCGCCAGCGGCCTGCCCACCGGCAAGGAGTGGCTGCTGCTGGCGCCGTTCCGTGACCAGTTGCCGGCCAAGCTGTTCAGC GAACCGTACAAGGTCAGCCACACCGATGGCCGGGGTATTAGCCGCCAGACCCTGCGCCAGGCCCTGGGCCTGCTCGCCGAGGCCGGCTGGAAGCTGCACG GCCAGCGCCTGGTCGACAGCAAGGGCCAGCAATTGCGCATGGAACTGCTGCTGGTAAATCCCAACCTTGAACGCATCCTGCAACCTTATGTCGAAAACCT GTCCAGCATCGGCATCGATGCGCGCTTGCGCACCGTGGACCGTGCCCAGTACAAACAACGCCTGGACCAGTTCGATTTCGACATGATTCTGATGACCCTG AACCAGACCCTCAGCCCCGGCCTCGAACAGTGGCTGTACTTCCATTCCAGCCAGGCCGCGACAAAGGGCAGCAAGAACTATGCTGGGGTCAAGGACCCGG TGGTCGACCACCTGCTCGACACCCTGCTCGCCGCCCGCACCCGCGATGACCAGGTCGCCGCTGCCCGCGCCCTGGACCGCGTGCTCTCATGGCACTACTA CATGATCCCCAACTGGTACCTCGACAACCATCGCCTGGCCTACCGCAACCGGTTCGCCTTCGTCACCACGCCGCCCTACACCCTTGGGCTGAACAGCTGG TGGATCAAGACTTCGGAGAAAGCCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCAACGCACCGTCTGCGCCGGCTGGCAGGCAGCCTGTTGCTCGCCTGCCTGAGCCTTCCCGCGCTGGCCGCACCGCAGCACGCGCTCACCCTTTACGA TGAGCCACCCAAGTACCCCGCCGACTTCAAGCACTTCGACTACGTCAACCCGGATGCGCCCAAGGGCGGCACCTTCCGCCAGTCCAGCTTCGGCGGCTTC GACAGCCTCAACCCGTTCATCAACAAAGGCGTGGCGGCCGAGAACATCGGCATTATCTACGACACCCTGATGCGCCAGAGCCAGGATGAACCGTTCACCG AATACGGCCTGGTGGCCGGCAAGATCGAAAAGGCCCCGGACAACAGCTGGGTGCGCTTCTACCTGCGCCCTGAAGCGCGCTTCCATGATGGCCATCCGAT GCGCGCCGACGACGTGGTGTTCACCTTCAACGCCCTGATCAAGGACGGCGCCCCGCTGTACCGCCAGTACTACGCCGACGTCGCCGAAGTGGTCGCCGAA
Amino Acid Sequence
>ABC transporter substrate-binding protein
MIRPLLLSLSLALSFPAAAMVSESHGYAQFGTLKYPATFTHFDWVNPQAPKGGTLRAMAFGTFDTLNPYTFKGSSPITTPNFQQYGISELNEPLMVGTGQ YDPSGDEPTSSYGLIARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQRVDILGPLRIRFVFKRAGNPLLILRLGE MPVLPKHYWQKRDFKATTFEPPLGSGPYRITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEHQAKNWANGYN FPAVRRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVRQALGLMLDFEWTNRALFSSAYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFS EPYKVSHTDGRGISRQTLRQALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTVDRAQYKQRLDQFDFDMILMTL NQTLSPGLEQWLYFHSSQAATKGSKNYAGVKDPVVDHLLDTLLAARTRDDQVAAARALDRVLSWHYYMIPNWYLDNHRLAYRNRFAFVTTPPYTLGLNSW WIKTSEKAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site