Pseudomonas putida S12, RPPX_RS00865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.10.105.10:FF:000005 ABC transporter substrate-binding protein - - 323 581 5.4E-107
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 6 606 8.6E-101
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 9 603 5.3E-80
Gene3D G3DSA:3.40.190.10 - - - 26 601 0.0
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 113 518 2.3E-72
Gene3D G3DSA:3.10.105.10 - - - 323 581 0.0
CDD cd08497 PBP2_NikA_DppA_OppA_like_14 - - 39 587 0.0
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 49 603 2.33E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.