Pseudomonas poae RE_1-1-14, H045_02565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGCGCTCGTTTGCGCGGCGCGGCGATGACCAGAGCCAGGCCAGCCTCACCAAAGCGGTGGACGCCGCGTTTCAGGTGCTCGGTGCACGCGTGGACA GCCAGCCACTGAGCGTGCATAGCGATTTCGCCACCGTGCAGCTGCAGATTGACCAGACACGCCTGGAGCAGATACTGGTCAACCTGATCGGCAACGCCCT GGATGCCATGCAAGACCAACCGTCGCCGGAACTGTGGCTGGAAGGCAGCAGCAGCGAAGGCAAATATCGCCTGCGGGTGCGCGACAACGGCCACGGCGTT GACGCCGAGGCGCGCAAACATTTGTTCGAACCGTTCTTCACCACCAAGCCCGGCGAGCAAGGCCTGGGACTTGGCCTGACACTGTCGGCCAGCCTGGCGG CAGCCACCGGCGGCAACCTTGCCGTGGAACACCCGGCCAGTGGTGGTACGGCCTTCGTCCTGAGCCTGCCGCTGGCGGGCACTCAACCCACTGAGTCGAC
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| DNA Sequence for Gene |
>H045_02565
ATGAATATCACGCCCCAAGACCTCACCGTGCTGATCGTCGAAGACGACCCCCATGTGCTGCTCGGCTGCCAGCAGGCCCTGGCGCTGGAAGACATTGCCA GTGTCGGCGTGGGCAGCGCCGAAGAGGCGCTCAAGCGCGTCGACGAGCACTTCGCCGGCATCGTCATCAGCGACATTCGCCTGCCGGGTATTGATGGGCT GGAACTGCTGACCCGCCTCAAGGCTCTGGATAAAAGCCTGCCGGTCGTGCTGATCACCGGCCATGGCGACATCGCCATGGCGGTCGGCGCCATGCGCAAC GGCGCCTATGACTTCATGGAGAAACCCTTTTCTCCCGAACGCCTGGTCGACGTCGCCCGTCGTGCCCTGGAGCAGCGCGCTCTGGCGCGCGAGGTCTGGG CGCTGCGTCGCCAACTGGCCGAGCGCGACTCGCTGGAAGGCCGCATCATCGGGCGTTCGCAGGCGATGCAGAACCTGCGCGACCTGATCGCCAACGTCGC CGACACTTCGGCCAACGTGCTGATCGAAGGCGAGACCGGCACCGGCAAGGAGTTGGTCGCGCGTTGCCTGCATGATTTCAGCCGCCGCCATTCCCACCCG TTCGTCGCGCTCAACTGCGGTGGCCTGCCGGAGAACCTGTTCGAAAGCGAGATTTTCGGCCACGAAGCCAATGCCTTCACCGGCGCGGGCAAGCGCCGCA TCGGCAAGATCGAACACGCCCATCAAGGCACGCTGTTTCTCGATGAAGTGGAAAGCATGCCGATCAATCTGCAGATCAAGCTGCTGCGGGTGTTGCAGGA ACGCACCCTGGAACGCCTGGGCTCGAACCAGAGCGTGGCGGTGGATTGCCGAGTGATCGCCGCCACCAAGTCCGACCTCGATGAACTGAGCCGCGCCGGC CAGTTCCGCAGCGACCTGTACTACCGGCTCAACGTGGTCACCCTGGAACTGCCGCCGCTGCGCGAGCGTCGCGAAGACATTCTGCAACTGTTCGAACACT TTTTGCAGCAATCATCCCTGCGCTTCGATCGCAGCGTGCCGGACCTGGACAACCAGACGTTGTCGAGCCTGATGAGCCACGATTGGCCGGGCAACGTGCG CGAACTGCGCAACGTCGCCGAACGCTTCGCCCTGGGCCTGCCGGCCTTCAAAAAGCCCGGCGCGGGAGGCAGCAACCACGGCCTGGCCTTCACCGAAGCG GTGGAAGCCTTCGAACGCAACCTGCTCAACGACGCGCTGCAACGCAGCGGCGGCAACCTGACCCAGGCCAGCCAGGAACTGGGAATGGCCAAGACCACGC TGTTCGACAAGGTCAAAAAATACGGGTTGGGCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGATCTATTGTTGAAGGCCGCCCTCGGCGCGGCGGTGGTGGTGATACTTGCCGCACTGGCCAAGACCCGAAACTATTACATCGCCGGCCTGGTGCCGCT GTTCCCGACCTTTGCGCTGATCGCCCATTACATCGTCGGCAAGGGCCGTTCGGTGGAGGATTTGAAGACCACCATCCTGTTCGGGATGTGGTCGATCATT CCGTATTTTGTGTATCTGGCGACACTGTATGTGATGGTCGACCGGATGCGGCTGGAAGCCTCACTGGCCGTCGCCACCGTCGCCTGGCTGATCGCCGCGA CGCTGCTGGTGAGCGTATGGGTCAGGGTTCACACCTGACACACTGCCGTCAACCATGTGGGAAATCCCTCTCAGCGCACTATCTTGTCCACCTGAATCCC CAGCTTCTTCAGCCGATACCAGAAGCTTCTCTCGGAAATCCCGATCTTCGCCGCCGCTGCAGCCTGCACGCCATTGCTCTCCTGCAGCGCCGCCAGAATG
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| Amino Acid Sequence |
>sigma-54 dependent DNA-binding response regulator
MNITPQDLTVLIVEDDPHVLLGCQQALALEDIASVGVGSAEEALKRVDEHFAGIVISDIRLPGIDGLELLTRLKALDKSLPVVLITGHGDIAMAVGAMRN GAYDFMEKPFSPERLVDVARRALEQRALAREVWALRRQLAERDSLEGRIIGRSQAMQNLRDLIANVADTSANVLIEGETGTGKELVARCLHDFSRRHSHP FVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHAHQGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDELSRAG QFRSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRSVPDLDNQTLSSLMSHDWPGNVRELRNVAERFALGLPAFKKPGAGGSNHGLAFTEA VEAFERNLLNDALQRSGGNLTQASQELGMAKTTLFDKVKKYGLGH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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