Pseudomonas poae RE_1-1-14, H045_02565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_02565
Name
Replicon chromosome
Genomic location 565785 - 567122 (- strand)

Cross-References

RefSeq YP_007396085.1
GI 447915517
Entrez 14502317
INSDC AGE24589.1
NCBI Locus Tag H045_02565
UniParc UPI0002AF4DB1
UniProtKB Acc M4JW34
UniProtKB ID M4JW34_9PSED
UniRef100 UniRef100_M4JW34
UniRef50 UniRef50_P10046
UniRef90 UniRef90_G8Q7X0

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma-54 dependent DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -6.96
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 49257.6
Isoelectric Point (pI) 6.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 614 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001271 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_02565

Human Homologs

References

No references are associated with this feature.