Pseudomonas protegens CHA0, PFLCHA0_c47070 (ada3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACGCCACCGCCCGGGACCGGACCATGCCGGCTTTCCTGAAGAAGGAAAACGCCAACCATGTGCCGGTCAATGCCTTGTGGCTGACCAACGTGATGATCC AGATCTTTCTGCTGATCACCCTGTTCTCTGCCGGCACCTACACCAGCCTGATCTACCTGGCGTCGTCGATGATCCTGGTGCCCTACCTGTGGTCGGCGGC CTATGCGGTGCTGCTCAGCGGTCGCGGGGAAACCTACGAGCAGGCCTCCCGGGAACGCAAGAAGGACCTGTTCATCGCCACCGTGGCCCTGAGCTACGCC ATCTGGCTGCTGTACGCCGGCGGCTTGAAGTACCTGCTGCTGTCGGCCTTGTTGTATGCGCCGGGGGTAATCCTGTTCGCCAAGGCCAAGCATGAGCAGG GCGAGCCGTTGTTCACCCCGCTGGAAAAACTGATCTTCGCGGCCGTGGTCATCGGCGCCTCATTGGCGGCCTATGGCTTGTACAGCGGCCTGCTGGCGCT
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| DNA Sequence for Gene |
>PFLCHA0_c47070
|ada3
GTGATTCATCACCTGCCCTACCAGGGCGCCTACGACTGGCCGGCGATGCTGGGCTTTCTCAGGGCCCGCGCCATCGAAGGCCTGGAGGTGGTGCAGGGCG ATACTTATGCCCGCACCTTCGCGCTGGCGGGCGGGCAAGGCATCTTGAGTGTCTGCCCGGGGCCTGCAGGCCATTTGCAGGTGCAGTTGCAGGGGGCCGA GCAGGCCCTGCTGCCCCAGGTGCTGGCGCGCTTGCGCCGGCAATTCGATCTGGACGCGGACCTGTCCCTGATCAACCGCCATCTGGCCCGTGATCCGCTG CTCGCACCGTTGCTGGCGGCACGCCCGGGCCTGCGAGTACCCGGGGCCTGGGACGGTTTCGAGCTGGCCATTCGCGCCGTGCTGGGCCAGCAGATCACCG TGCAGGGCGCGATCCGCCTGGCGGGCAAGCTGGTGGCGGTGCATGGCCGGTTGCTGGCCAGTCCCGACCCGCAGTGGCCTGGTTTGACCCACCTGTTTCC CACTCCCCAGGTGCTGTCCACTGCCAACCTGGCCGACCTGGGAATGCCCCGCAGCCGGGCACGCACGCTGTCTGCCGTGGCCCAGGCCTTGCTCGACGAT CCACTCCTGTTCGAACCCAGGGCCAGCTTGCAACAGGGGGTGGAGCGCCTGTTGCAATTGCCGGGAATCGGCGATTGGACCGCGCAATACATCGCCCTGC GCCAGTTGCGCGAGAGCGATGCCTTTCCGGCGGCGGACGTAGGCCTGTTCAACGCTGTGGCACGTCTGCAGGGGCTGCGGCCCAATGCCCGCCAACTGCT GGCCCGGGCCGAGGCCTGGCGGCCGTGGCGCGGTTATGCGGCGCAGCATTTGTGGGCGGCCATGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACGGTCCGCCGGTTCCTACGGGATCAACTGGCAGCCAGGGCCTTCACCACCATCTGGGGCGATGGGCGCCCAGGGCGGTGGCCGGGCAACTCCACTGCA CCGGCGTTCCATTGATGTGCAACGGCACCCGCAGGCGCCGCGCCGGCCCCCAAGGGGTCTGTTCCAGCACCAGCCCCTGATCCTCGTGGTCTTCGGCGCG CGGTGGAATTTCGGCGGTCGCTGACGGGGAATGATCAACCAGCAACTGGGCGGTACGGGCCAGGGACAGGCGCGCCGATGCGCCCTGCTCGCCGCTCAGG GACCGGGTCAGTGCCCGCAGGGCGCTGGCTGCCATCAGGTAACCGGTGGCGTGATCCAGGGCCTGGACCGGCAGTGGCACAGGCCTGTCCGCGGCTTTCC AGGCCATGCCGGCTTCGGCGATGCCGCAGCTCATCTGCACCAGGCTGTCGAAGCCCCGGCGGTTGCGCCAGCCGTAGGCATTGAGGCTGACTTCGATCAG
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| Amino Acid Sequence |
>putative regulatory protein Ada
MIHHLPYQGAYDWPAMLGFLRARAIEGLEVVQGDTYARTFALAGGQGILSVCPGPAGHLQVQLQGAEQALLPQVLARLRRQFDLDADLSLINRHLARDPL LAPLLAARPGLRVPGAWDGFELAIRAVLGQQITVQGAIRLAGKLVAVHGRLLASPDPQWPGLTHLFPTPQVLSTANLADLGMPRSRARTLSAVAQALLDD PLLFEPRASLQQGVERLLQLPGIGDWTAQYIALRQLRESDAFPAADVGLFNAVARLQGLRPNARQLLARAEAWRPWRGYAAQHLWAAMG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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