Pseudomonas protegens Pf-5, PFL_5968 (pepP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5968
Name
pepP
Replicon chromosome
Genomic location 6784603 - 6785937 (- strand)

Cross-References

RefSeq YP_263026.1
GI 70733253
EC Number 3.4.11.9
Entrez 3480340
INSDC AAY95158.1
NCBI Locus Tag PFL_5968
UniParc UPI000054E20A
UniProtKB Acc Q4K407
UniProtKB ID Q4K407_PSEF5
UniRef100 UniRef100_Q4K407
UniRef50 UniRef50_C1D9M0
UniRef90 UniRef90_Q4K407

Product

Feature Type CDS
Coding Frame 1
Product Name
Xaa-Pro aminopeptidase
Synonyms
Evidence for Translation
Charge (pH 7) -13.52
Kyte-Doolittle Hydrophobicity Value -0.241
Molecular Weight (kDa) 49409.7
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 632 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004805 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5968
Search term: pepP

Human Homologs

Ensembl 110, assembly GRCh38.p14
X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
E-value: 5.4e-74
Percent Identity: 34.8

References

No references are associated with this feature.