Pseudomonas protegens Pf-5, PFL_5968 (pepP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACGGCCTGTTGCTGGGTCGCAGCTGCGCCGGCGCCGGCTTCGAAGTCGACGGCTGGCTGGTGGACGCCGCCGAACTGCTCGAAGGCGAGCCGCAAGACA ACGTGCGCAGCGCCTTGATCGGCCTGCAGGAGATGGTCAAGGGCGAGCTCACCAGCGATGACATGACCGTGGTCCTGCTGCTGCCCAGCGACGACGCCCC CCTGGCCGAGCGTGCCGCTGCCCTGGGCCAGTGGTGCCAGGGCTTCCTCGCCGGTTTCGGCCTCAACTCCCGCGACAGCAGTGCCCTTAGCGTCGAGGCC ACGGAAGTGTTGCAGGACCTTGCAGCCATTGCTCAGGTCCAGGACGCGCTGGAGGAATCCGATGACGGTGAAAGCGACTACATGGAAGTGATGGAGTACC TGCGGGTTGCGCCTCTGCTGCTATTCACCGAGACCAACAAGACTGTTGCGCCGGCTGCCAAGCCTTCTCTGCACTGACTGACAGGGAACTGCGTCCGCCC
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| DNA Sequence for Gene |
>PFL_5968
|pepP
ATGATTCATATCCCGAAAGCGGAATACAGCCGTCGCCGCAAGGCGCTCATGGCGCAGATGGAGCCCAACAGCATCGCGATCCTGCCGGCGGCGGCCGTGG CCATTCGCAATCGCGATGTGGAGCACGTCTACCGCCAGGACAGCGATTTCCAGTACCTCAGCGGGTTTCCCGAGCCCCAGGCGGTGATCGTGCTGATCCC CGGCCGGGAGCACGGCGAGTACGTGCTGTTCTGTCGCGAGCGCAACCCGGAGCGCGAACTCTGGGACGGATTGCGGGCCGGCCAGGAGGGCGCGATTCGC GACTACGGTGCCGATGACGCATTTCCCATCACCGATATCGACGACATCCTGCCGGGCCTGATCGAAGGCCGCGACCGGGTTTACTCGGCCATGGGCAGCA ACCCCGAATTCGACCGTCACCTGATGGACTGGATCAACGTGATCCGCTCTAAAGCGCACCTCGGCGCCCAGCCGCCGAACGAATTCGTTGCCCTGGATCA TCTGCTGCACGACATGCGCCTGTATAAATCGGCGGCAGAAGTGAAGGTGATGCGCGAGGCCGCACGGATTTCCGCCCAGGCCCATATCCGCGCAATGCAG GCCAGCCGTCCCGGGTTGCATGAGTTCAGCCTGGAAGCCGAGCTGGATTACGAATTCCGCAAGGGCGGGGCGAAGATGCCGGCCTATGGCTCGATCGTCG CGGCGGGCCGCAACAGCTGCATCCTGCATTACCAACAGAATGACGCCGTGCTCAGGGACGGTGACCTGGTGCTGATCGACGCCGGTTGCGAGATCGACTG CTATGCCAGCGATATCACCCGCACCTGGCCGGTCAACGGCAAGTTTTCGCCGGAGCAGAAGGCGATCTACGAACTGGTGCTGGCTTCCCAGGAAGCGGCG TTTGCCCAGATCGCCCCGAACAAGCACTGGAACCAGGCTCATGAGGCGACGGTCCAGGTGATCACCGCCGGCCTGGTGCAACTGGGCCTGCTGGAAGGCG ATGTGGACCAGCTGATTGCCAGCGAGGCCTACAAGACGTTCTACATGCACCGTGCCGGACACTGGCTGGGCATGGATGTACACGACGTCGGCGAGTACCG GGTCGGCGGCGAGTGGCGGGTGTTGGAGGTTGGCATGGCGCTGACCGTGGAGCCGGGCATCTACATATCCCCGGACAACCAGCAGGTAGCGAAGAAGTGG CGCGGCATCGGCGTGCGCATCGAGGACGACGTGGTAGTGACCAAGCAGGGCTGTGAAATTCTGACAGGTGGCGTGCCCAAGAGCGTGGCCGAGATCGAGG CCTTGATGGCCGCTGCGCGGACCCAGGCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGGTCAATCTGGCCATCATCGGTGGCGGTCTGGTAGGCGCGAGCCTGGCCCTGGCGCTGCAGGCCGGGGCCAAGGCCCGGGGCTGGAAGATCGTGCT GATCGAGCCCTTCGCCCCGGGCGACAGTTTCCAGCCCAGCTACGACGCCCGCTCCTCGGCCCTGTCCTTTGGCGCCCGGCAGATCTACCAGCGCCTGGGG CTGTGGCAGGCGATCTCCCGGCGGGCCGAGCCGATCAAGCAGATTCACGTGTCCGACCGTGGGCGGTTCTCCACCGCGCGCCTGTCGGCCATGGAAGAAG GGGTGCCGGCCCTGGGCTATGTGGTGGAAAACGCCTGGCTCGGCCAATGCCTGTGGCAAGGGCTGGACAAGGACGTGATCAGCTGGCGCTGCCCGGCCGA AGTCACCCGTCTGGAGCCCCTGGCAGGCGGCTATCGCCTGACCCTGAACGACGAAACCACCCTGGAATGCGATCTCGCCGTGCTGGCCGACGGCGGCCGC
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| Amino Acid Sequence |
>Xaa-Pro aminopeptidase
MIHIPKAEYSRRRKALMAQMEPNSIAILPAAAVAIRNRDVEHVYRQDSDFQYLSGFPEPQAVIVLIPGREHGEYVLFCRERNPERELWDGLRAGQEGAIR DYGADDAFPITDIDDILPGLIEGRDRVYSAMGSNPEFDRHLMDWINVIRSKAHLGAQPPNEFVALDHLLHDMRLYKSAAEVKVMREAARISAQAHIRAMQ ASRPGLHEFSLEAELDYEFRKGGAKMPAYGSIVAAGRNSCILHYQQNDAVLRDGDLVLIDAGCEIDCYASDITRTWPVNGKFSPEQKAIYELVLASQEAA FAQIAPNKHWNQAHEATVQVITAGLVQLGLLEGDVDQLIASEAYKTFYMHRAGHWLGMDVHDVGEYRVGGEWRVLEVGMALTVEPGIYISPDNQQVAKKW RGIGVRIEDDVVVTKQGCEILTGGVPKSVAEIEALMAAARTQAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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