Pseudomonas protegens Pf-5, PFL_5823 (chpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCCATGGCCGGTGACGCCGGGCGCGGCTTTGCCGTGGTGGCCGACGAGGTGCAGCGGCTGGCGGAGCGTTCCTCGGCAGCCACGCGGCAGATCGAGAC CCTGGTGCGGGCGATCCAGACCGACACCAACGAGGCGGTGATCTCCATGGAGCAGACCACCACCGAAGTGGTGCGCGGCGCGCGCCTGGCCCAGGACGCC GGGGTGGCCCTGGAAGAGATCGAAGGCGTGTCCAAGACCCTGGCGGCGCTGATCCAGAGCATCTCCAACGCGGCCCAGCAGCAGACCTCTTCGGCCGGGC AGATTTCCCTGACCATGAACGTGATCCAGCAGATCACCTCGCAGACTTCGTCCGGTTCCACCGCCACCGCCGAGAGCATCGGCAACCTGGCGAAGATGGC CAGCCAGCTGCGCCGCTCGGTGTCCGGCTTCACCCTGCCGGCCACCCGGGGCCCGGCCCCGAATGACAACCGCTGACACAAGGCTTTGACTGGAGTGGTT
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| DNA Sequence for Gene |
>PFL_5823
|chpA
ATGGTTGATCGGCACGACTATGTAGCCCTGGAGTGGGTCAAGGGCGAAATTGCCGAGACCCTGAAGCAGGCGCATCAGGCGCTGGAGCATCTGGCGGACG ATCCCCAGGCCCTGGAGGCCATCGACCAGTGCCTGGAAGGCATTCATCTGGTCCATGGCAGCCTGCAGATGGTGGAGTTCTACGGCGCCGCGCTGCTGGC TGAAGAAATGGAAAAGCTCGCCCTGGCCCTGCAGCAGGGGCGCGTGGCCCAGCGCGACGAAGCCCTGCGCCTGCTGCGCCAGGCCATCGGCCAGTTGCCC CAGTACCTGGACCGGGTGCAGAGCGCGCGGCGCGACCTGCCGCTGGTGGTGCTGCCGCTGCTCAACGACCTGCGCAGTGCCCGGGGCGAGAGCCTGCTCT CGGAAACCAGCCTGTTCAGCCCGCAACTGCCCAGCCTGCCGCCCCTGAGCGACAAGGCCCTGGCGGCTTTGGAACCCCTGGAGTTGCCCAACCAGTTGCG CAAGCTGCGACACATGTTGCAGACCGCCCTGGTGGACCTGCTGCGCGAGCAGGATGACGAGCAGAGCCTGGGCTACATGGCCAAGGTCTTCGAACGCCTG GAAGCCTTGTGCCAGGACGCCCCGCTGGCGCCCTTGTGGCATATCGCCTCGGCCCTGGTGGAAGGCATGCGCCACGACGAGATCGCCAACAGCCCGGCGG TGCGCAGCCTGCTCAAGGATGCCGACAAGGAGCTCAAGCGCCTGCTGGAACAGGGCATGGCCGGGATCAACCGGCCGGCCCCCGATGAATTGCTCAAGAG CCTGCTGTTCTATATCGCCAAGGCGCGCCATCCCACCCCATTGATGCTGACCATGAAAGAACGTTACGGACTGGATGACGCCTTGCCCGACAGCGCGGTG GTGGACGAGGAGCGGGCCCGCCTGGCCGGCCCCGACCGGGATGCCATGCGCTCGGTGCTGACCGCGGTGTGCGATGGCCTGGTGCGGGTCAAGGAACGCC TCGACCTGTTCGTGCGCAGCGACCGCCAGCACACCGACGACCTCGAAGGGCTGCTGTCGCCCCTGCGGCAGATCGCCGACACCCTGGCGGTGCTGGGCTT CGGCCAGCCGCGCAAGGTCATCATCGATCAGTTGGCGGTGGTCCAGAGCCTGGCCCAGGGCCAGCGCGCGCCGGACGACGCGGTGCTGATGGATGTGGCG GGGGCCCTGCTGTACGTGGAAGCGACCCTGGCCGGCATGGCCGGCACCGTGGAGCCCGAAAGCCGTGAGGAAAGCCGCCTGCCCACCACCGACCTGACCC AGATCCACCAGTTGGTGATCCAGGAGGCGCGGGTTTGCCTGCACCAGGCCAAGGACCTGATCGCCGAGTGCATCGAGGCCGACTGGGACGCCGAACACCT GCAGGCGCTGCCCGAGCTGCTGACCCAGGTGCGCGGCGCCCTGGCGATGATCCCGCTGCCCCGCGCGGCGGGGCTGATGCAGGCCTGCCAGCAGTTTGTC GTCGAACACCTGCTGGCGGCCCGTTCCCGGCCCGATTGGCAGCAACTGGACCACCTGGCGGATGTGCTCACCAGCCTGGAGTACTACCTGGAACGCCTGA GCGAGGACCACGAGGCGCCGGGGGAGAAGATCCTCGATGTGGCCCAGCAGGGCCTGCTCGCCCTGGGCTATGTGCCGGTGGAGCAGGTGCCGTTGCTCGA TCAGCCCCTGAGCCCCAGCGAAGCCCTGGTGATGCAGGACCTGCAAGAGCTGGACGATCCCCGGGTGGCGCAGTCCCTGGCGGATGTCCTGGCGGTGCCG GTCTCGGCCCTCAACCCGCCGGCCCTGATCACCCCGGGCAGCCTGTTGCCGCCGCCAGGGGACGAGGAGCCGGTGGACGATGAACTGCGGGAAGTCTTCC TCGAAGAAACCGAGGAAGTGCTGGAGATGCTGCGCGAGTATCTGCCGCGCTGGGCCGCGGACCCCCATGGCACATCTGCCCTGAGCGAACTGCGCCGGGC CTTCCACACTCTCAAGGGCAGCGGGCGCATGGTGCGCGCGCTGGTGCTGGGGGAGCTGGCCTGGGCGGTGGAAAACCTCCTCAACCGGGTGCTGGAGCAC AGCGTGGAGCCCGGTGTCGAGGCCCGGCAACTGGTGGCCGACACCCTGCAACTGTTGCCGGAACTGATTGCCGAGTTCGCCCAGCAGGCCCAGCGCCAGC GCGACGATGTCGACCGCCTGGCCGCCCGGGCCCATGCCCTGGCCAATGGCGCGCAAGGCTCGGCGCCAGTGCCGGCCGAGGCCTTGGACCCGCAGTTGCT GGAGATCTTCCGCACCGAGGCCCAGACCCACCTGGACAGCATCAACCGCTTTCTCGAGCAGGCCGCCGAACACGTACCGCTGCAGGCCAGCGACGAACTG CAACGGGCCCTGCACACCCTCAAGGGCAGCGCCTCCATGGCCGGAGTGCTGCCGATTGCCGAGCTGGCCGGCCCTCTGGACCAATTGGCCCGGGAATACC GGGCGCACTTGATCCCCCTGGACCTGGACGAGGTGGAGCTGCTGCTGGAAGCCGAAGGCCTGCTGCGCCGGGGCCTGCGGCAGCTGGACAGCGACCCGCT GGCGCCCATCGATGGCGCCCGCTCCCTGGTGGGCCGCGCCCTGGCCCTGCTGGGGGAGCGCCTGGAAACCCTGCTCAGCGCCCCGGACAGCGCGCCCCGG GCCAAGCGCGACCCGCAGTTGATCAACAACTTCCTGGCCCAGGGCATGGACATCCTGTTGGATGCCGAAAGCCTGCTGCGCCGTTGGCAGCAGCACCCTG GCGAGCGTCAGGAACTCAGCGCCCTGCTGGATGAGTTGACCACCCTGGGCGAGGGCGCGCACCTGGCCGACCTGCACCCGGTGGACGAGCTGTGCGAAGC CTTGCTCGATCTCTATGGCGCGGTGGAAGAGAGCAGCCTGGCCGTCAGCGAGCGTTTCTTCCACGAAGCCGAAAGCGCCCATGATGCCTTGATCAACATG CTCGACGAGCTGGCCGCAGGCCAGGAAGTCAGCCCGCGCCCGGAACGGGTGCAGGCCTTGCGCGAGCTGCTGGATGAAGGTCTGGACCCTTCTGCCACGG GCCTGATCAAGAGCGATGGCAGCCGCGCCCTGAGCATCAGCGAACTGGGCGCGGCCACGGCTCGCCTGGAGCAGGCCGAGGCCCCGTTGCAGGCGGACGA CGAAATTGTCGAGATCTTCCTCGAAGAGGCGGTGGATATCCTCGAAAGCGCCGACCAGGCCCTGCAGCGCTGGCTGGCCGACCCGGACAATGGCGCGCCG CTGTCTTCCCTGCAGCGAGACCTGCACACCCTCAAGGGCGGCGCACGGATGGCCGAAGTGGCACCGGTGGCGGAACTGGCCCAGGAGCTGGAGTCGCTGT ACGAGGGGCTGGTGGACCGGCGCTACAGCCACAGCCAGCACCTGGGCCTGCTGTTGCGCAGCAGCCACGAGCAACTGGCACTGCTGCTGGAACAGTTGCA GGGGCAGCATCCCCTGGACGAATCCCGGGCGCAGATCGAGGCCGTGCGGTCGTACCGGCAGCAGGCCGCCAGCACCGGCGAAGTGGCCCAGGGCACGGTC GAGGCAGACCGCGCGGCCCAGGACCCGGAGCTGCTGGAAATCTTCCTCGAAGAAGGTTTCGACATCATCGACAGCTCTGCCGCGGCCCTGGCCCGCTGGC AGGCCGAGCCCCAGGGTCGCCAGGAAGTGGAAACCCTGCTGCGCGACCTGCACACCCTCAAGGGCGGTGCGCGCATGGTGGAAATCGCCCCCATCGGCGA TCTGGCCCATGAACTGGAATTTCTCTTCGAAGGCCTGTCCGCCGGCCTGCTGCAACCCAGCCCGGTGCTGTTCACCCTGTTGCAGAAGAGCCACGACCGC CTGGCCCAGATGCTCGATGCGGCCCGTGCCGGCCAGCCCATCGAGCCGGCCCAGAAGCTCATCGATGCGATCCACGACCTGAGCCATCCGCGGGTAGCGA CCGGCGTTGCCGCAGAAGCTGCACTGCCCAGCACCAAGCCCGAGCCCGCTGCGCCCGCGGCGGAAGCGGCAGTGGCGGGGGACATGGTCAAGGTCTCGGC AGAGCTGCTGGACGACCTGGTGAACCTGGCCGGGGAAACCTCGATCTTCCGTGGCCGTATCGAACAGCAGGTCAACGATGCACGCACGGCATTGGGCGAG ATGGAAACCACCATCGAGCGCATGCGCGACCAGTTGCGCCGCCTGGACACCGAAACCCAGGGGCGGATTCTCAGCCGCCAGCAGGTGGAGGCCGAGCGCC TGGGCTACGAAGAGTTCGACCCCCTGGAAATGGACCGCCACTCGCAGTTGCAGCAATTGTCCCGGGCCCTGTTCGAATCGGCTTCGGACCTGCTGGACCT CAAGGAAACCCTGGACCGGCGCAACCACGACGCCGAGAACCTGTTGCAGCAGCAGGGCCGGATCAACACCGAATTGCAGGAAGGCCTGATGCGCACGCGC ATGGTGCCGTTCGAGCGCATGGTGCCCAGGCTCAAGCGCATCGTCCGCCAGGTGGCCGAAGAGCTGGGCAAGGACGTGGAGTTCGTGGTCGGCAACGCCG AAGGGGAAATGGACCGCAACGTTCTCGAACGCATGGTCGCGCCCCTGGAACACATGCTGCGCAACGCCGTGGACCACGGTCTGGAATCGGCCGAGGCGCG CCTTGCGGCAGGCAAGCCGGCACAGGGGCGGATCAGCCTGGACCTGTCCCGCGAGGGCGGCGACATGATTTTCGACATGCGCGACGACGGCGCCGGGGTG CCCCTGGAAGCCGTGCGCAAAAAAGCCATCAAGCGCGGCCTGCTGGACCCCGAGGCGCAGCTCAGCGACCGCGAAGTGCTGCAATTCATCATGCAGCCGG GGTTTTCCACCGCCGAGAAGATCACCCAGATTTCCGGGCGCGGGGTGGGCATGGACGTGGTCCATGAAGAGGTGCGCCAGTTGGGCGGCAGCATGAGCAT CGACTCGGTTGCCGGCCAGGGCGTGCATTTTCGCATTCGCCTGCCGTTCACCGTGTCGGTCAACCGCGCGCTGATGGTGCAGTGCGCCGACGAGCAGTAC GCGATTCCGCTGAATACCGTGGAGGGCATTGTCCGGGTGCTGCCCGCAGAGCTGGACGGCTACTACCAGCTCGACCCACCGCGCTATGAGTACGCCGGCC AGTCTTATCAGCTGTGCTACCTGGGGGAGCTGCTGCACACCGTGCCACGGCCGAAGCTGCTGGGCCAGGTGCAGCCGCTGCCGGTGCTGCTGGTGCACTG CAACGAGCAGCGCATCGCGGTGCAGGTGGATACCACCGCCGGCACCCGGGAAATCGTGGTCAAGAGCCTGGGGCCGCAGTTCGCCGCGGTCCAGGGGCTG TCCGGGGCGACGATTCTCGGCGATGGTCGGGTGGTGCTGATTCTCGATTTGCTGGCGCATATCCGCGCCTTGCAGGCCCAGGCACCGCTGCCGCGCCTGG CGGGCGACGAGCCGGCCAGCGAGGTGCAACCGCCGCGGCCGATGCTGGTGCTGGTGGTGGACGACTCGGTCACGGTGCGCAAGGTCACCAGCCGCCTGCT GGAGCGCCACGGCATGAATGTGCTCACCGCCAAGGATGGGGTCGACGCCATGGCGCTGCTGGCCGAGCACACCCCGGACCTGATGCTGCTGGACATCGAA ATGCCGCGCATGGATGGCTTCGAGGTAGCGATCCAGGTACGCAACGACCCGCGCCTGCAACACCTGCCGATCATCATGATCACCTCCCGCACCGGCCAGA AACACCGCGACCGGGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCCTATCAAGAGTCGGTGCTGCTGGAAAGCATCGCCCTGTGGAGCAAGAC CCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCACCGCGCCAGCACTCTCACCGGGCTGCTGCTGCCCCTGGCCGACCGTACCCTGATCCTGCCCAACGTGGCCGTGGCCGAGCTGATCGACTATCAGCAG GGCACCTTCGACCTGGATTCACCGCCCTGGTACCTGGGTCGGGTGCTGTGGCGCGAGCGGCGGATTCCGCTGATCAGCTTCGAGTCGGCCTGCGGTGGCA GGACCGTGATTGGCGAGCGGGCGCGGATCGTCGTGCTCAATGCCCTGGGCGGGCGCCCGGAGCTGAAGTTCATGGCCCTGCTGGTGCAGGGCATTCCCCG CTCCTGCAAGCTCGACAGCCAGTTGAGCTATGTCGACGTGCCCCTGGCTGCGCTGGAAAAGGCCGCGGTGCAGGTGGTCGAGCAGGTGGCCAAGGTGCCG GACCTGCTGGCCCTGGAAGAGCTGCTGGTGACGGGGCTCTAGGCCTCTTGGCCGGCAAGCCGGCCGCTACACAACACCGCCGGTAGGAGCTGGCTTGCCA
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| Amino Acid Sequence |
>sensor histidine kinase/response regulator ChpA
MVDRHDYVALEWVKGEIAETLKQAHQALEHLADDPQALEAIDQCLEGIHLVHGSLQMVEFYGAALLAEEMEKLALALQQGRVAQRDEALRLLRQAIGQLP QYLDRVQSARRDLPLVVLPLLNDLRSARGESLLSETSLFSPQLPSLPPLSDKALAALEPLELPNQLRKLRHMLQTALVDLLREQDDEQSLGYMAKVFERL EALCQDAPLAPLWHIASALVEGMRHDEIANSPAVRSLLKDADKELKRLLEQGMAGINRPAPDELLKSLLFYIAKARHPTPLMLTMKERYGLDDALPDSAV VDEERARLAGPDRDAMRSVLTAVCDGLVRVKERLDLFVRSDRQHTDDLEGLLSPLRQIADTLAVLGFGQPRKVIIDQLAVVQSLAQGQRAPDDAVLMDVA GALLYVEATLAGMAGTVEPESREESRLPTTDLTQIHQLVIQEARVCLHQAKDLIAECIEADWDAEHLQALPELLTQVRGALAMIPLPRAAGLMQACQQFV VEHLLAARSRPDWQQLDHLADVLTSLEYYLERLSEDHEAPGEKILDVAQQGLLALGYVPVEQVPLLDQPLSPSEALVMQDLQELDDPRVAQSLADVLAVP VSALNPPALITPGSLLPPPGDEEPVDDELREVFLEETEEVLEMLREYLPRWAADPHGTSALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLEH SVEPGVEARQLVADTLQLLPELIAEFAQQAQRQRDDVDRLAARAHALANGAQGSAPVPAEALDPQLLEIFRTEAQTHLDSINRFLEQAAEHVPLQASDEL QRALHTLKGSASMAGVLPIAELAGPLDQLAREYRAHLIPLDLDEVELLLEAEGLLRRGLRQLDSDPLAPIDGARSLVGRALALLGERLETLLSAPDSAPR AKRDPQLINNFLAQGMDILLDAESLLRRWQQHPGERQELSALLDELTTLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSERFFHEAESAHDALINM LDELAAGQEVSPRPERVQALRELLDEGLDPSATGLIKSDGSRALSISELGAATARLEQAEAPLQADDEIVEIFLEEAVDILESADQALQRWLADPDNGAP LSSLQRDLHTLKGGARMAEVAPVAELAQELESLYEGLVDRRYSHSQHLGLLLRSSHEQLALLLEQLQGQHPLDESRAQIEAVRSYRQQAASTGEVAQGTV EADRAAQDPELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVETLLRDLHTLKGGARMVEIAPIGDLAHELEFLFEGLSAGLLQPSPVLFTLLQKSHDR LAQMLDAARAGQPIEPAQKLIDAIHDLSHPRVATGVAAEAALPSTKPEPAAPAAEAAVAGDMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDARTALGE METTIERMRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGLMRTR MVPFERMVPRLKRIVRQVAEELGKDVEFVVGNAEGEMDRNVLERMVAPLEHMLRNAVDHGLESAEARLAAGKPAQGRISLDLSREGGDMIFDMRDDGAGV PLEAVRKKAIKRGLLDPEAQLSDREVLQFIMQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMSIDSVAGQGVHFRIRLPFTVSVNRALMVQCADEQY AIPLNTVEGIVRVLPAELDGYYQLDPPRYEYAGQSYQLCYLGELLHTVPRPKLLGQVQPLPVLLVHCNEQRIAVQVDTTAGTREIVVKSLGPQFAAVQGL SGATILGDGRVVLILDLLAHIRALQAQAPLPRLAGDEPASEVQPPRPMLVLVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMALLAEHTPDLMLLDIE MPRMDGFEVAIQVRNDPRLQHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIALWSKTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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