Pseudomonas protegens Pf-5, PFL_5823 (chpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1208 1327 3.27E-27
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1210 1310 1.4E-13
Pfam PF02895 Signal transducing histidine kinase, homodimeric domain IPR004105 Histidine kinase CheA-like, homodimeric domain 1362 1498 1.5E-5
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1848 1961 2.6E-37
Coils Coil Coil - - 1464 1484 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1846 1965 2.13E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 905 1032 1.1E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 763 859 1.1E-8
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1208 1306 2.5188E-13
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1669 1682 7.5E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 626 750 7.72E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 1.0E-11
Gene3D G3DSA:3.40.50.2300 - - - 1850 1969 1.7E-40
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 626 760 9.1E-28
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 550 9.42E-16
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 763 837 7.08165E-9
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 862 2.2E-12
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1066 1154 6.93778E-13
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1589 1603 7.5E-9
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1684 1817 9.68E-24
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1498 1684 1.6E-51
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1645 1663 7.5E-9
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1068 1167 2.7E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 723 5.5E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 107 1.7E-6
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1066 1184 8.11E-25
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1548 1684 8.3E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1066 1163 1.0E-5
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 763 886 6.41E-21
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1850 1961 2.4E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 719 1.01517E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 904 1026 3.59E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1065 1198 6.6E-25
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1757 1819 1.3E-19
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1360 1499 5.4E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1208 1305 1.4E-8
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1501 1682 1.31E-34
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 8.24E-20
SMART SM00260 chew_2 IPR002545 CheW-like domain 1677 1821 2.4E-27
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1500 1684 1.3E-60
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1690 1823 5.5E-22
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1544 1685 1.5E-23
Coils Coil Coil - - 1391 1418 -
Coils Coil Coil - - 723 743 -
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 627 755 0.0
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 761 883 1.2E-19
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 628 706 3.4E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1206 1336 4.5E-30
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1850 1961 2.28602E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.