Pseudomonas protegens Pf-5, PFL_1319 (pcaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02430
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53901
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02803
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02430 JCVI: 3-oxoadipyl-CoA thiolase IPR012793 Beta-ketoadipyl CoA thiolase 2 400 0.0
Pfam PF00108 Thiolase, N-terminal domain IPR020616 Thiolase, N-terminal 4 267 8.5E-77
CDD cd00751 thiolase IPR002155 Thiolase 5 399 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 276 399 9.17E-45
FunFam G3DSA:3.40.47.10:FF:000010 Acetyl-CoA acetyltransferase (Thiolase) - - 1 399 0.0
PIRSF PIRSF000429 Ac-CoA_Ac_transf IPR002155 Thiolase 1 400 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 3 275 5.26E-86
NCBIfam TIGR01930 JCVI: acetyl-CoA C-acyltransferase IPR002155 Thiolase 6 398 0.0
Pfam PF02803 Thiolase, C-terminal domain IPR020617 Thiolase, C-terminal 276 399 3.9E-43
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 1 400 0.0
PANTHER PTHR18919 ACETYL-COA C-ACYLTRANSFERASE - - 1 400 1.2E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.