Pseudomonas protegens Pf-5, PFL_0660 (cobJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TACGAACAAGTGATCAGCGACTTCTACGACAGCGCCAGCGAGGAGCTGGCGCAGCACCTGGACGCCGGCCGCGACGTGGCGGTGATCTGCGAAGGCGACC CGTTCTTCTACGGCTCCTACATGTACCTGCACGACCGGCTGGCCGAGCGTTACCAGGCCGAAGTGGTACCGGGGGTGTGCTCGATGCTGGGCGGCGCTTC GGTGCTGGGCGCGCCGTTGGTGTATCGCAACCAGAGCCTGTCGGTGCTTTCCGGGGTGCTGCCCCATGAGGAACTCAAGCGTCGCCTGGCGGACGCCGAT GCGGCGGTGGTGATGAAGCTGGGACGCAACTTCCCCAAGGTGCGCCAGGTCCTGGAAGAACTGGGGCTGGCGCGGCGTGCGCTGTACGTCGAGCGCGCCA CCATGGTCAACCAGAAGATCGTGCCGCTGGATGACGTGGAGCCGATGTCCTCGCCGTACTTCTCGCTGATCATCGTTCCCGGCGAAAGGTGGCAAGGCTG
DNA Sequence for Gene
>PFL_0660 |cobJ
ATGGCCCGTTCAACTCCGGCCATCGTCATCCTTGGCCAAGGCAGCCTCGACACCGCACGGCAGATCCAGCGGCTGTATCCCGACTCGTTGATCCACGGTC TGGCGGAACGGGTCGAAGGCGCCGACCGGGTCTACCACGAATTCGGCGCGACCCTGCGCCAGCTCTATCAGCAGGACACGCCCATCATCGCCCTGTGTGC GGCCGGCATCGTGATCCGCACCCTGGCGCCGCTGCTGCTGGAAAAGGGCGCCGAGCCGCCGGTGCTGGCGGTGGCCGAAGACGGCAGCGCCGTGGTGCCG CTGCTGGGCGGCCTGGGCGGCGTCAACGTCATGGCCCGGGAAATCGCTGCGGGCCTTGGAGTGGCCGCGGCTATTACCACTAGCGGTGAACTGCGCTTCG GCACCTGCCTGCTCAACCCGCCCAGTGGCTATGCCCTGGGTGACCTGGAGCTGGGCAAGCGGTTCGTCTCCGACCTGCTGGGTGGTGAAAGCGTGCGCAT CGAAGGCGCAGCACCCTGGCTGGCTGCGGCGAAGCTGCCCGAGAACGACCAGGCCCGCCTGACCATCCGGGTCGGTTCCGCCGAGCGCGAGCCCGTGGCC AATGAGCTGCTGATCTACCCCCGCAGCGTGCTGGTTGCCTGCCGTGGGCAGCGGCTTGCCGGCGAAGCTGATAGCGACCTGGCCACCCACATCCGCCAGG CTCTGCATCAGGCGCGCATCGCGGTGCAGTCGGTGGCGTGCCTGCTGGCCGCTGACCGCGACATGGCCGACCGTGCCCTGCACCAGGCAGCAGCGCAACT GGGCGTACCGTTGCGTTTCCTGCCGGCCGCCGACAGTGTCGCCGAACTGGCGCAACAGGCCGTGCCGCAATTGCTGCCGCCGCTGAAGGTGGGCGAGGAC ATCGCCATTGCTGTGGCCAGCCAGCCCCTGGACCCGGAGCAGATTGGCCGCCCCCGTGGGCGCCTTGCCGTGATCGGCCTCGGCCCTGGCGCCGCCGAGC TGATGGTGCCGGCAGTGAAAGCCGAACTGGCCCGGGCCAACGACATTCTCGGTTATGAAACCTACGTGCGCATGGCCGGTCCGTTTCGCGCCGACCAGGT GATGCACTGCACCGATAACCGCGAAGAGATGCAGCGCGCCCGTCACGCCTTCGAGCTGGCGGCCCAGGGCCGTTCGGTGGTGGTGGTGTCGTCCGGCGAC CCGGGAGTGTTCGCCATGGCCGCGGCGGTGATCGAAGCCCTGCACGAATCCAGCGACCCGGCCTGGCACAGCGTCGATCTGGAGATCCTCCCGGGCGTCT CCGCCTCCCTGGCTACCGCGGCACAGGCCGGTGCGCCTCTGGGCCATGACTTCTGCGTGCTGTCGCTGTCGGACAATCTCAAGCCCTGGGACATCATCGA GAAGCGCCTGGACCTCGCCTCCCAGGCGGATCTGGCCCTGGCCTTCTACAACCCGATTTCCCGCTCGCGGCCCTGGCAACTGGGCCGGGCCCTGGAGATC GTGCGCCAGCACCGTACGCCGCAAACCCCTGTGGTATTGGGGCGCGACATTGGCCGCCCGGGCCAGACCCTGCGGGTCATCACCCTGGGCGAGCTGACCC CGGAGCAGGTGGACATGCGCACCATGGTGCTGGTGGGTTCCTCCACCACCTGCGTCTTCCCCCGGGCCGGGGGCGGCGACTGGGTGTACACCCCGCGCTG GTACGGCAATAAACCCCTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGTCGCTGGGTTCGGCGGTCAGCAGCCAGGTGATGAATTCGAAGAAGCCGGCCCATCTGGCGGGGATGCGGACGGCGACGAAAGCTTCCCGGTCGCCCA GGTCGAAATCCCAGACGCCGCCGCTGTCCTTGTCCAGCAAGTAGCCGCCTTCGCCTTGCAATGAGGTGAAGGCCACAAAGTTCTCTGGCAGCTCCCAGAC CTCATGGATGAACTCGGTGCCCATGCGAACTTCCTCGCCGGGCCCGGCAATGTCGAGGAGCACTTCGTCGCTGGCGCGGCTGCTGAAATCGGCGGGGTGG CAGGCCAGGTAGATCTGTGCGAACTCGCTGTCCGGGGCAATGCCCAGGGCTTCCAGCGCCAGGGTGACCTCGGCGCTTTCAGGAAGCGGGCGGTAGCGGG GCTGGGCTTCGATCAGGGCAATCAGTGGCGCTGGAATCATGCAGGGTACTCGGTGGCGCGTGGCCATTTGTCCAGCGGCAGATGGTTCATGTCGCGGGTG
Amino Acid Sequence
>CbiG protein/precorrin-3B C17-methyltransferase
MARSTPAIVILGQGSLDTARQIQRLYPDSLIHGLAERVEGADRVYHEFGATLRQLYQQDTPIIALCAAGIVIRTLAPLLLEKGAEPPVLAVAEDGSAVVP LLGGLGGVNVMAREIAAGLGVAAAITTSGELRFGTCLLNPPSGYALGDLELGKRFVSDLLGGESVRIEGAAPWLAAAKLPENDQARLTIRVGSAEREPVA NELLIYPRSVLVACRGQRLAGEADSDLATHIRQALHQARIAVQSVACLLAADRDMADRALHQAAAQLGVPLRFLPAADSVAELAQQAVPQLLPPLKVGED IAIAVASQPLDPEQIGRPRGRLAVIGLGPGAAELMVPAVKAELARANDILGYETYVRMAGPFRADQVMHCTDNREEMQRARHAFELAAQGRSVVVVSSGD PGVFAMAAAVIEALHESSDPAWHSVDLEILPGVSASLATAAQAGAPLGHDFCVLSLSDNLKPWDIIEKRLDLASQADLALAFYNPISRSRPWQLGRALEI VRQHRTPQTPVVLGRDIGRPGQTLRVITLGELTPEQVDMRTMVLVGSSTTCVFPRAGGGDWVYTPRWYGNKPL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site