Pseudomonas protegens Pf-5, PFL_0660 (cobJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01466
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01466
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 435 569 1.1E-52
Gene3D G3DSA:3.40.50.11220 - - - 2 125 1.1E-19
Gene3D G3DSA:3.30.420.180 - IPR036518 CobE/GbiG C-terminal domain superfamily 205 319 3.1E-6
SUPERFAMILY SSF159672 CbiG N-terminal domain-like IPR038029 GbiG N-terminal domain superfamily 5 212 1.83E-40
CDD cd11646 Precorrin_3B_C17_MT IPR006363 Precorrin-3B C17-methyltransferase domain 322 568 1.80546E-121
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 322 532 1.5E-32
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 319 569 8.77E-50
PANTHER PTHR47036 COBALT-FACTOR III C(17)-METHYLTRANSFERASE-RELATED - - 317 571 1.5E-91
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 320 434 8.1E-26
NCBIfam TIGR01466 JCVI: precorrin-3B C(17)-methyltransferase IPR006363 Precorrin-3B C17-methyltransferase domain 322 568 3.2E-85
Pfam PF11760 Cobalamin synthesis G N-terminal IPR021744 Cobalamin synthesis G, N-terminal 51 129 1.2E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.