Pseudomonas sp. UW4, PputUW4_04133 (nrdA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCGCGGCCTACACGCTGGTTCCCTCTTTCACACACAATTTACGCACAGGTTTATCCACAGGTAGTACGTTGCAATCCCCCCCTAAAACGCATTATCTT GTAGCCCGGCGCTAAAAAAACCCTAGATATAGGGTTTTGCGCAAAAAACCAAACACAAACCAGACACCAATTTCAAGCGCTTTTATTGCCTCTGTCCGGT TGAACCAAGCGTATTTTCGAAAGACCAAACCGCGCATGCGGATGGCTACTGTGTTTCGGCCCCGAGTGGTGAAAACGGTACGGGTGTTGCAGTCCCAACT GTCACCTGCAAAGGACCAAGGTTTCAGGCCCAAGGCGTGAGACCAAAGACTTCGGCATGGAAGCGGCGCCCCATAAAGCCCCCTTCCTACTGTCCCGAAG TTGTTATGCCCGGCGCTCGCCGGTTGTAGTGCTTCAGGACGGAACGGTGGGCACCGTGATGGTGCCCAAACAAACATAGAGAATGTGGAGACACTCCCCC
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| DNA Sequence for Gene |
>PputUW4_04133
|nrdA
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGGCACCTTGCCGCAGGCCGCTGATTCGAATTCGGATCTGTCCGCCACCGCGCCTGGCCAACTGCGCG TGATCAAGCGTAACGGCACTGTCGTTCCCTACACCGATGACAAAATCACCGTCGCCATCACCAAAGCGTTTCTCGCAGTTGAAGGCGGCACCGCTGCTGC CTCGTCGCGAATCCACGACACCGTTGCCCGCCTGACCGAACAGGTCACCGCGACCTTCAAGCGTCGCATGCCATCGGGCGGCACCATCCATATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGCGAGCAGAAAGTCGCTCGCGACTACGTGATCTACCGTGATGCCCGTTCCAAGGAACGTGCCG TTCGTACCACCGAAGAGCCGGTACAAGCGCACCCCTCGATCCGCATCACCCGTGCCGACGGCAGCCTGGCGCCGCTGGACATGGGCCGCCTGAACACCAT CGTCACCGAAGCGTGCGAAGGCCTGGAAGAAGTCGACGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCCTGACCGACGTC AACACCGCCCTGGTGATGACTGCCCGTACCCTGGTTGAACGCGAGCCGAACTACTCGTTCGTGACCGCCCGCCTGCTGATGGACACCCTGCGTGCCGAAG GCCTGGGCTTCCTCGGCGTCGCCGAAAGCGCCACCCACCACGAGATGGTCGACCTGTACGCCAAGGCGCTGCCGGCCTACATCGCCAAGGGTATCGAGTA CGAGCTGCTGAACCCTGAGCTGGCCTCCTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAGCAATTCACCTACCTGGGCCTGCAG ACCCTGTACGACCGTTACTTCATCCACAAGGATGGCGTGCGTTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCGATCGAAGAAA AAGACCGCGAAGCCCGTGCCATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCTTCGACCCCGACCCTGTTCAACGCCGGTACCCTGCGTCC ACAGCTGTCGAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCGGGCGGC CTGGGCAACGACTGGACGCCGGTTCGTGCGCTCGGTTCGTACATCAAGGGCACCAACGGCAAATCCCAGGGCGTTGTTCCATTCCTCAAAGTAGTGAACG ACACCGCCGTTGCCGTTAACCAGGGTGGCAAGCGCAAAGGCGCTGTGTGTGCCTACCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGAGCTGCG CAAGAACACCGGTGATGACCGCCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGTGTCTTCGATGACGGCAAGTGG ACCCTGTTCTCGCCATCCGAAGTGCCGGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACCCGG GCAAGGTCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAAATGCTGTCCATGCTGTTCGAAACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTCGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAGATCGCC GTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCATGC TCGATAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGAAGAACTCCAACTTCAAGCACCGTCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCCTTGTACTTGCAGCACATCCCTTACGGCTCCGACGCTGCCGTCGATTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTACGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGCGGCTCGTACGAGACGTTCCAGGGTTCGCTGTGGTCCAAAGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCGAGG CCCGTGGCCAGAAGTACATCGATGTCGACCTGAACGAAACCCTGGACTGGGCACCGGTTCGCGCCCGTGTACAGAAAGGCATTCGTAACTCCAATATCAT GGCCATCGCACCGACCGCGACCATCGCCAACATCACCGGCGTATCGCAGTCGATCGAACCGACCTACCAGAACCTGTATGTGAAATCGAACCTGTCGGGC GAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTCAAGGCTCGCGGTCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TGCAGCAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACCGCCTTCGAAGTGGACACCAAGTGGATCGTCGACGCTGCCAGCCGTCGTCA GAAGTGGATCGACCAGGCTCAGTCGCTGAACCTGTACATCGCCGGCGCCTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTG AAAACCACTTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCTGTTTCCAGCGGCGGCAACCACG GTGAAGATTCGGTCCTGGCAGCGCCTGCCGGCCCTGCTCCAGTGCCGAAGGCTTGCGCCATCGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGAGCCAACAAGCGCCGCAAGGCGCTTACTCGAAACCCCCGATCTGCCTCTGGCGGGTCGGGGGTTTTCTTTTGCCTCAAGGAAAGCGGTGACTGATC TGACGCTTTCGCGGGCAAGCCCGCTCCCACAGGGGACCGAGTCTTTCCAGATAAACACGATCAACTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCATCAC CTCCAACACAAAACCTCAGGCCACAAAAAAGCCCCTCTCTCGAGGGGCTTTTTATGCAGCGCGGCCCAGCATCAAGCCATCTGAATGATGGTCTGCATGA TGGTGCTCTCGGTAGAAATGGTCTTGGCGTTCGCCTGGTAGTTGCTCTGTCCCTTGATCAGGTCGACCAGTTCGTTGGTCAGGTTGACGTTGGACTCTTC CAGGGAATTGGAAACGATCGAACCCAGGGTGCCAGTCTGCGGCGCATCGTAGCCCGGGATGCCCGAGGTGTAGGTTTCTTTCCAGCTGGAGCCGCCTACC
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQGTLPQAADSNSDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDARSKERAVRTTEEPVQAHPSIRITRADGSLAPLDMGRLNTIVTEACEGLEEVDGDLIQRETLKNLYDGVALTDV NTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAKALPAYIAKGIEYELLNPELASFDLEKLGKAINHERDQQFTYLGLQ TLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKDREARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGG LGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKW TLFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVDFADKSMEAVSYYAIQAS CDLADERGSYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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