Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCAGCGAAGTGCTGGCGCTCAATCCCGATGGTGTGTTCCTGTCCAACGGTCCTGGCGACCCCGAGCCATGTGACTACGCCATCCAGGCGATCAAGGACGT TCTGGAAACCGACATCCCGGTATTCGGCATCTGCCTCGGCCACCAGCTGCTGGCTCTGGCCTCAGGCGCCAAGACCCTGAAAATGGGCCACGGCCACCAC GGTGCCAACCACCCGGTCCAGGACCTCGACACTGGCGTGGTGATGATCACCAGCCAGAACCACGGTTTCGCCGTGGACGAGAGCAGCCTGCCGAGCAATC TGCGTCCGATCCACAAGTCGCTGTTCGACGGCACTCTGCAGGGCATTGAGCGCACCGACAAGGACGCCTTCAGCTTCCAGGGTCACCCTGAAGCCAGCCC GGGCCCGAACGATGTCGCCCCGCTGTTCGACCGCTTCATCGAAGCCATGGCCAAGCGCCGCTAAGCCCGCCGACTGACCTACGGATTCGAGAGAGATAAA
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DNA Sequence for Gene |
>Psefu_3597
ATGCCAAAACGTACAGACATCAAAAGTATCCTGATCCTCGGCGCCGGCCCCATCGTCATCGGCCAGGCGTGCGAGTTCGACTATTCCGGCGCCCAGGCCT GCAAGGCCCTGCGCGAGGAAGGCTTCCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGGCCACCGTGGCCAAGATCATCGAGAAGGAGCGTCCGGACGCGCTGCTGCCGACCATGGGCGGCCAGACCGCGCTGAACTGCGCGCTG GATCTGGAGCGTCACGGCGTGCTGGAGAAGTTCGGCGTCGAGATGATCGGTGCCAACGCCGACACCATCGACAAGGCCGAAGACCGTTCGCGCTTCGACA AGGCCATGAAGGACATCGGCCTGGCCTGCCCGGTATCGGGTATCGCCCACAGCATGGAAGAAGCCTACGGCGTGCTCGAGAAGGTCGGCTTTCCGTGCAT TATCCGCCCGAGCTTCACCATGGGCGGCACCGGTGGCGGCATCGCCTACAACCGCGAAGAGTTCGAGGAAATCTGCACCCGTGGTCTGGACCTGTCGCCG ACCAACGAGCTGCTGATCGACGAGTCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCGCCGGCCCAGACCCTGACCGACAAGGAATATCAGATCCTGCGCAACGC CTCCCTGGCGGTGCTGCGCGAGATCGGTGTTGAAACCGGTGGCTCCAACGTGCAGTTCGGCATCTGCCCGAACACCGGCCGCATGGTCGTCATCGAGATG AACCCGCGCGTGTCGCGCTCTTCGGCCCTGGCTTCCAAGGCCACCGGTTTCCCGATCGCCAAGATCGCCGCCAAGCTGGCCGTGGGTTACACCCTCGACG AACTGCAGAACGACATCACCGGCGGTCGCACCCCGGCGTCCTTCGAGCCGGCCATCGATTACGTGGTCACCAAGATCCCGCGTTTCGCCTTCGAGAAATT CCCCAACGCCGACGCCCGCCTGACCACTCAGATGAAGTCCGTCGGTGAAGTCATGGCCATCGGCCGTACCTTCCAGGAATCCCTGCACAAGGCGCTGCGC GGTCTGGAAGTCGGCGTATCCGGCTTCGATCCGAAGCTCGATCCGGCCGATCCGGAAGCCGAAAGCACCCTCAAACGCGAGCTGATCGTGCCGGGCGCCG ACCGTATCTGGTACGTGGCCGATGCCTTCCGTGCCGGCAAGACCGTCGAGGAAGTGTTCGAGCTGACCCGCATCGACGAATGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGACGAGCAGCGCATCAAGACTCTGGGCCTGTCGAGCATCGACCGCGACCTGATGTTCAGCCTCAAGCGCAAGGGTTTCTCCGATGCG CGCCTGGCCGCGCTGCTCGGCGTCACCGAGAAGAACCTGCGCAGCCACCGTCATAAGCTCAAGGTGCTACCGGTCTACAAGCGTGTCGACACCTGCGCCG CCGAGTTCGCCACCGACACCGCCTACATGTACTCGACCTACGAGGAAGAGTGCGAGGCCAACGCCAGTGGTCGCGACAAGATCATGATTCTCGGCGGTGG CCCGAACCGCATCGGTCAGGGCATCGAGTTCGACTACTGCTGCGTACACGCCGCTCTGGCCATGCGTGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACTGACTACGACACCTCCGATCGCCTGTACTTCGAGCCGGTGACCCTGGAGGACGTGCTGGAAATCGTCCGCGTCGAGCAGC CCAAGGGCGTGATCGTCCAGTACGGCGGCCAGACCCCGCTGAAGCTGTGCCGCGCCCTGGAAGAAGCGGGCGTGCCGATCATCGGCACCAGCCCGGACGC CATCGACCGCGCCGAAGACCGCGAGCGTTTCCAGCAGATGGTGCAGCGCCTCGGCCTGCGTCAGCCGGCCAACGCCACTGCGCGCAGCGAAGAAGAAGCG CTGACCCTGTCCAAGAATATCGGATACCCGATGGTGGTGCGTCCGTCCTACGTACTGGGCGGTCGGGCGATGGAAATCGTCTACCAGGAAGAAGAGCTCA AGCGTTACATGCGCGAAGCCGTTAAGGTTTCCAACGACAGCCCGGTGCTGCTGGATCGCTTCCTCAACTGCGCCATCGAGGTGGACGTGGATGCGGTCAG CGACGGCGAGATCGTGGTGATTGGTGCGATCATGCAGCACATCGAGCAGGCCGGCGTTCACTCTGGTGACTCGGCGTGCTCGCTGCCGCCGTACTCGCTG CCGGCGCACATCCAGGACGAAATCCGCGACCAGGTCAAGAAGATGGCCCTGGAACTGGGCGTCGTCGGCCTGATGAACGTGCAGATGGCCGTGCAGGGCG AGGACATCTACGTGATCGAGGTCAACCCGCGTGCCTCGCGTACCGTGCCGTTCGTGTCCAAGTGCATCGGCGAGTCGCTGGCCAAGGTGGCGGCCCGCGT GATGGCTGGCAAGAGCCTGGCCGAGCTGGGCTTCACCCAGGAAATCATCCCGCCGTTCTTCAGCGTCAAGGAAGCGGTGTTCCCGTTCAACAAGTTCCCG GGTGTCGACCCTATCCTCGGCCCGGAAATGAAGTCCACTGGTGAAGTGATGGGCGTTGGCGACAGCTTCGGCGAGGCGTTTGCCAAGGCGCAGCTCGGTG CCAGCGAGATCCTGCCGAACTCCGGTTGCGCATTCATCAGTGTGCGTGAAGACGACAAGCCGGAAGCCGTACGGGTCGCCCGCGATCTGGTCGCGCTGGG CTTCGAAGTGGTGGCCACTGCCGGCACCGCCAAGGTGATCGAAGCGGCTGGTCTGCCGGTGCGCCGCGTCAACAAGGTGACCGAGGGCCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAGGGCCGTCAGTCCATCGCTGACTCCTACTCCATTCGTCGTAACGCTCTGC AGCACAAGATCTACTGCACCACCACCATCGCGGCGGGGCAGGCGGTCTGCGAGGCGCTCAAGTTCGGTCCCGAGAAGACCGTGCGCCGTCTGCAGGATCT GCACGCAGGAATCAAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAAGTACCCCATGACCATCCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGGCGCACCTGACCAAGGTGCGTCGCCCGGCGCTCAGTCAGGCGATTGCCGA AGCTCGTGAGCTGGGTGACCTCAAGGAAAACGCCGAATACCATGCCGCCCGCGAGGAGCAGGGCATGGTTGAGGCGCGCGTGCGTGATATCGAAGGTCGC CTGCAGAATGCGGTGATCATCGACGTCACCACCATTGCCCATACCGGCAAGGTGATCTTCGGCACTACTGTGGAAATCGCCAACGTCGAAACCGACGAGA GCGTGACCTACCAGATCGTTGGCGAGGACGAAGCCGATATCAAGCAGGGCAAGATTTCCGTGGGTTCGCCCATCGCTCGAGCCCTGGTGGGCAAGAATGA AGGTGACGTGGTTGGTGTCAACACGCCCAGTGGCCTGGTCGAGTACGAGATTGTCGAAGTTCGCCACGTCTGACCGCATGGCTGCGCGTGACAGCGCAGC
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Amino Acid Sequence |
>carbamoyl-phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPVSGIAHSMEEAYGVLEKVGFPCIIRPSFTMGGTGGGIAYNREEFEEICTRGLDLSP TNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPNADARLTTQMKSVGEVMAIGRTFQESLHKALR GLEVGVSGFDPKLDPADPEAESTLKRELIVPGADRIWYVADAFRAGKTVEEVFELTRIDEWFLVQIEDLIKDEQRIKTLGLSSIDRDLMFSLKRKGFSDA RLAALLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEANASGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLGLRQPANATARSEEEA LTLSKNIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVDAVSDGEIVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEIRDQVKKMALELGVVGLMNVQMAVQGEDIYVIEVNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAELGFTQEIIPPFFSVKEAVFPFNKFP GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNSGCAFISVREDDKPEAVRVARDLVALGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTVRRLQDLHAGIKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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