Pseudomonas fulva 12-X, Psefu_3597

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02786	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006807	nitrogen compound metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_01210_B	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfv01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfv00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		L-arginine biosynthesis IV (archaebacteria)	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
MetaCyc		L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	pfv00250	Alanine, aspartate and glutamate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		UMP biosynthesis III	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
MetaCyc		UMP biosynthesis II	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
MetaCyc		UMP biosynthesis I	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.20:FF:000003	Carbamoyl-phosphate synthase large chain	-	-	554	662	4.7E-63
Hamap	MF_01210_B	Carbamoyl-phosphate synthase large chain [carB].	IPR006275	Carbamoyl-phosphate synthase, large subunit	1	1062	13.147181
PANTHER	PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	-	-	6	1061	0.0
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	297	326	1.2E-65
CDD	cd01424	MGS_CPS_II	IPR033937	Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain	942	1051	3.84608E-52
SUPERFAMILY	SSF56059	Glutathione synthetase ATP-binding domain-like	-	-	673	933	5.48E-103
SUPERFAMILY	SSF52440	PreATP-grasp domain	IPR016185	Pre-ATP-grasp domain superfamily	1	127	5.18E-49
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	19	33	1.2E-65
FunFam	G3DSA:3.40.50.1380:FF:000004	Carbamoyl-phosphate synthase large chain	-	-	936	1072	3.4E-63
SMART	SM00851	MGS_2a	IPR011607	Methylglyoxal synthase-like domain	955	1041	1.9E-35
Gene3D	G3DSA:1.10.1030.10	-	IPR036897	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	404	553	7.3E-53
FunFam	G3DSA:3.30.1490.20:FF:000001	Carbamoyl-phosphate synthase large chain	-	-	686	755	3.5E-27
FunFam	G3DSA:3.30.470.20:FF:000007	Carbamoyl-phosphate synthase large chain	-	-	119	403	0.0
Gene3D	G3DSA:3.30.470.20	-	-	-	119	403	0.0
FunFam	G3DSA:1.10.1030.10:FF:000002	Carbamoyl-phosphate synthase large chain	-	-	405	553	7.7E-58
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	380	398	1.2E-65
FunFam	G3DSA:3.40.50.20:FF:000001	Carbamoyl-phosphate synthase large chain	-	-	1	116	6.7E-54
Pfam	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	673	875	2.5E-33
SUPERFAMILY	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain	IPR036897	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	397	553	2.22E-52
Pfam	PF02142	MGS-like domain	IPR011607	Methylglyoxal synthase-like domain	956	1041	8.5E-21
SUPERFAMILY	SSF52440	PreATP-grasp domain	IPR016185	Pre-ATP-grasp domain superfamily	557	675	2.73E-49
Gene3D	G3DSA:3.30.470.20	-	-	-	665	935	9.4E-121
Gene3D	G3DSA:3.40.50.1380	-	IPR036914	Methylglyoxal synthase-like domain superfamily	936	1072	4.8E-45
Pfam	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	128	334	7.6E-72
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	168	180	1.2E-65
SUPERFAMILY	SSF56059	Glutathione synthetase ATP-binding domain-like	-	-	128	401	1.59E-109
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	239	256	1.2E-65
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	204	223	1.2E-65
SMART	SM01096	CPSase_L_D3_2	IPR005480	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	424	547	8.0E-75
Gene3D	G3DSA:3.40.50.20	-	-	-	1	116	1.3E-48
SUPERFAMILY	SSF52335	Methylglyoxal synthase-like	IPR036914	Methylglyoxal synthase-like domain superfamily	938	1069	1.7E-41
Hamap	MF_01210_A	Carbamoyl-phosphate synthase large chain [carB].	IPR006275	Carbamoyl-phosphate synthase, large subunit	5	1067	13.439655
Gene3D	G3DSA:3.40.50.20	-	-	-	554	662	1.0E-50
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	48	58	1.2E-65
FunFam	G3DSA:3.30.470.20:FF:000013	Carbamoyl-phosphate synthase large chain	-	-	665	935	0.0
Pfam	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	IPR005480	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	427	505	2.8E-24
NCBIfam	TIGR01369	JCVI: carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit	IPR006275	Carbamoyl-phosphate synthase, large subunit	2	1053	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.