Pseudomonas fulva 12-X, Psefu_3055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0042908 | xenobiotic transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0015562 | efflux transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR32063
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.1320 | Multidrug efflux transporter AcrB pore domain like | - | - | 134 | 334 | 0.0 |
| SUPERFAMILY | SSF82693 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains | - | - | 140 | 333 | 1.57E-22 |
| Gene3D | G3DSA:1.20.1640.10 | Multidrug efflux transporter AcrB transmembrane domain | - | - | 8 | 518 | 0.0 |
| Gene3D | G3DSA:3.30.2090.10 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 183 | 281 | 0.0 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 394 | 418 | 9.5E-99 |
| SUPERFAMILY | SSF82866 | Multidrug efflux transporter AcrB transmembrane domain | - | - | 806 | 1026 | 8.5E-45 |
| SUPERFAMILY | SSF82714 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 722 | 808 | 1.7E-19 |
| Gene3D | G3DSA:3.30.70.1430 | Multidrug efflux transporter AcrB pore domain | - | - | 39 | 820 | 0.0 |
| FunFam | G3DSA:3.30.70.1430:FF:000001 | Efflux pump membrane transporter | - | - | 39 | 136 | 2.4E-28 |
| Pfam | PF00873 | AcrB/AcrD/AcrF family | IPR001036 | Acriflavin resistance protein | 2 | 1024 | 0.0 |
| PANTHER | PTHR32063 | - | IPR001036 | Acriflavin resistance protein | 2 | 1031 | 0.0 |
| Gene3D | G3DSA:3.30.70.1430 | Multidrug efflux transporter AcrB pore domain | - | - | 573 | 671 | 0.0 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 37 | 55 | 9.5E-99 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 9 | 33 | 9.5E-99 |
| SUPERFAMILY | SSF82866 | Multidrug efflux transporter AcrB transmembrane domain | - | - | 299 | 500 | 1.16E-48 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 555 | 572 | 9.5E-99 |
| FunFam | G3DSA:1.20.1640.10:FF:000001 | Efflux pump membrane transporter | - | - | 321 | 513 | 3.7E-69 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 339 | 362 | 9.5E-99 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 622 | 636 | 9.5E-99 |
| SUPERFAMILY | SSF82693 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains | - | - | 39 | 130 | 5.23E-24 |
| SUPERFAMILY | SSF82693 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains | - | - | 568 | 671 | 5.13E-26 |
| Gene3D | G3DSA:3.30.2090.10 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 724 | 812 | 0.0 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 448 | 471 | 9.5E-99 |
| Gene3D | G3DSA:1.20.1640.10 | Multidrug efflux transporter AcrB transmembrane domain | - | - | 519 | 1022 | 0.0 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 366 | 387 | 9.5E-99 |
| SUPERFAMILY | SSF82714 | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | 186 | 275 | 4.45E-21 |
| Gene3D | G3DSA:3.30.70.1440 | Multidrug efflux transporter AcrB pore domain | - | - | 672 | 870 | 0.0 |
| NCBIfam | TIGR00915 | JCVI: efflux RND transporter permease subunit | IPR004764 | Multidrug resistance protein MdtF-like | 2 | 1040 | 0.0 |
| PRINTS | PR00702 | Acriflavin resistance protein family signature | IPR001036 | Acriflavin resistance protein | 473 | 496 | 9.5E-99 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.