Pseudomonas fulva 12-X, Psefu_2282
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCTGCTGCTCCAGTACCGAATGGAAATCCTTGCGGCGCCAGGCCGGCGCACCGTGGGCGTCGATGAACAAGCGGGTGGTGGCCTGGGTGTGGGTGCGC GTGCCATCGTAGACCGCTGCCTTGCTGGCGCCGCGCTCGGCACCTTCACCGCTGCCCAGGTTGAGCTGGCAGGGCGCGTCGTAGCAGGCATGGCAGGCCA CGCAGTTCTGCGTGAAGATCGGCTGGATGTCGCGGCTGTAGGAAATGTCCTGGGCCATGGTCAACGGGCTGAGCAGAACGAAGCAAAGGGTCAACAACAG CCGGCAGTACATGGCGCAAAATTCCACGAAATTGGCCGCGCATTCTAGCCGTCTCGCCTGTGCTATCGCTATGCCTGCATGACTCTGCAGGCCGCTAGCA ACATGAACATAATTCATGCACAAGTGCACGGCGCAGAAATGCCGTCAGGGTTTGTTATCATCGGCGGCCTTGTCGTAGCCTCCCGTTCAGAGCCTTTTCC
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| DNA Sequence for Gene |
>Psefu_2282
ATGCCCTTGTCAGATCGCAGCGCCCGCCTCCAAGCACTTCAGCAAGCCCTCAAGGAACGCATCCTGATCCTCGACGGCGGCATGGGCACCATGATCCAGA GCTACAAGCTCGAAGAAGCCGACTACCGCGGCGAACGCTTCGCCGACTGGCCGAGCGACGTGAAGGGCAACAACGACCTGCTGCTGCTGACCCAGCCGCA GATCATCGCGGACATCGAGAAGGCCTACCTGGATGCCGGCGCCGACATCCTGGAGACCAACACCTTCAACGCCACCCAGGTGTCCCAGGCCGACTACGAC ATGGAGTCGATCGTCTACGAGCTGAACGTGGCCGGCGCCCGCGTGGCCCGTGAAGTGGCCGATGCCAAGACCCTGGAAACCCCGGATCGCCCGCGTTTCG TCGCAGGCGTCCTGGGCCCGACGAGCCGCACCTGCTCGATCTCCCCGGACGTCAACGACCCCGGCTACCGCAACGTCACCTTCGACGAGCTGGTGGAGAA CTACACCGAAGCGACCCGCGGCCTGATCGAGGGCGGCGCCGACCTGATCCTCATCGAGACCATCTTCGACACCCTCAATGCCAAGGCGGCGATCTTCGCC GTGCAGCAGGTGTTCGACGAGGACGGCGTTACGCTTCCTATCATGATCTCCGGCACCATCACCGACGCCTCAGGCCGTACCCTGTCGGGCCAGACCACCG AAGCGTTCTGGAACTCGGTGGCCCATGCCAAGCCGATTTCCGTGGGCCTGAACTGCGCCCTCGGCGCCAAGGAACTGCGCCCTTATCTGGCCGAGCTGGC GGCCAAGGCCGGCACCCACGTGTCCGCGCACCCCAACGCGGGCCTACCGAACGCCTTTGGTGAATACGACGAAACCCCGGCGCAAATGGCCGAGGTGGTC GAGGAATTCGCTGCATCGGGGCTGCTGAACATCATCGGCGGCTGTTGCGGCACCACGCCGGGCCACATCCAGGCCATCGCCGAGGCGGTCGCCAAATACC AGCCGCGCCCGATTCCGGAGATTCCCAAGGCCTGCCGCCTGTCGGGTCTGGAGCCATTCACCATCGACCGCAACTCGCTGTTCGTCAACGTCGGTGAGCG CACCAACATCACCGGTTCGGCCAAGTTCGCCCGGCTGATCCGCGAGGAGAACTACACCGAGGCCCTGGAAGTCGCCCTGCAGCAGGTCGAGGCCGGCGCC CAGGTGATCGACATCAACATGGACGAAGGGATGCTCGACTCCAAGGCGGCGATGGTCAGGTTCCTCAACCTGATCGCCGGCGAGCCGGACATCTCCCGTG TGCCGATCATGATCGACTCCTCCAAGTGGGAGGTGATCGAGGCGGGCCTCAAGTGCATCCAGGGCAAGGGCATCGTCAACTCGATCTCCATGAAGGAAGG TGTCGAGCAGTTCAAGCACCACGCCAAGCTGTGCAAGCGCTATGGCGCCGCCGTGGTAGTGATGGCCTTCGACGAGGTCGGCCAGGCCGACACCGCCGCG CGCAAGAAGGAAATCTGCCAGCGCAGCTACGACATTCTGGTCAATGAAGTGGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCGTGG CCACCGGCATCGAGGAGCACAACAACTACGCGGTGGATTTCATCGAGGCCTGCGCCTACATCCGTGACCAGCTGCCCTATGCGCTGAGTTCGGGCGGCGT CTCCAACGTGTCGTTCTCGTTCCGCGGCAACAATCCGGTGCGCGAGGCGATCCACTCGGTATTCCTCTACTACGCCATCCAGAACGGCCTCTCCATGGGT ATCGTCAACGCCGGCCAGCTGGAAATTTACGACGAGATTCCCAAGGAGCTGCGCGACGCGGTCGAGGACGTGGTGCTCAACCGCAACGACGGCGCCACCG AAGCACTGCTGGCCATCGCCGACAAGTACAAGGGCGACGGCGCAGCCAAGGAAGTCGAGAACGAAGAGTGGCGTTCGCTGCCGGTCGACAAGCGCCTGGA GCACGCGCTGGTTAAGGGCATCACCGCGTTCATCGTCGAGGACACCGAGGAATGCCGCCGGCAATGCGCGCGGCCCATCGAGGTGATCGAAGGCCCGCTG ATGAGTGGCATGAACGTGGTCGGCGACCTGTTCGGCTCGGGCAAGATGTTCCTGCCCCAGGTGGTCAAGTCCGCCCGAGTGATGAAGCAGGCCGTGGCGC ACCTGATTCCCTTCATCGAAGCCGAGAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTCATGGCCACCGTGAAAGGCGACGTGCACGACATCGGCAA GAACATCGTCGGCGTGGTGCTGGGCTGTAACGGCTACGACATCGTCGACCTGGGCGTAATGGTGCCGGCGGAAAAGATCCTGCAGACCGCCATCGCCGAG AAGTGCGACATCATCGGCCTGTCCGGCCTGATCACCCCGTCGCTGGACGAGATGGTCCACGTCGCCAAGGAAATGCAGCGCCAGGGCTTCAAGCTACCGC TGATGATCGGCGGCGCCACCACCTCCAAGGCGCACACCGCGGTGAAGATCGATCCACAGTACAGCAACGATGCCGTGGTCTACGTCACCGACGCCTCGCG CGCCGTGGGCGTGGCCACCCAGCTGCTGTCCAAGGAGCTGAAAGCCGACTTCGTGCAGAAGACCCGCGACGAATACGTGGTGGTGCGCGAACGCACCGCC GCCCGCGCCACCCGCACCGAGCGCCTGAGCTACGACAACGCGGTGGCCAACAAGCCGGCCTTCGACTGGAATGGTTACGTCGCGCCCAAGCCAAGCTTCA CCGGCGCTCAGGTGCTCGACGATATCGACCTCAACGTGCTGGCCGAGTACATCGACTGGACGCCGTTCTTCATCTCATGGGACCTGGCCGGCAAGTACCC ACGCATCCTCACCGACGAGATCGTCGGCGAAGCGGCCACCAGCCTGTTCAACGACGCCCAGGCGATGCTGCGCAAGCTGATCGACGAGAAACTGATCAAG GCCCGCGCCGTATTCGGTTTCTGGCCGGCCAATCAGGTGCGTGATGACGACATCGAGGTGTACGGCGACAACGGCGAGCAACTCGCCACCCTGCACCATC TGCGTCAGCAGACCATCAAGCCGGACGGCAAACCGAATCTGTCCCTGGCCGACTTCGTCGCGCCGAAGGACAGCGGCGTGACCGACTACGTCGGAGGTTT CATCACCACAGCTGGCATCGGCGCCGAGGAAGTGGCCAAGGCCTACGAGGCCAAGGGCGACGATTACAACGCGATCATGGTCAAGGCCCTGGCCGACCGC CTCGCCGAAGCCTGTGCCGAATGGCTGCACGAGCGCGTGCGCAAGGAGCATTGGGGTTACGCGGCGGACGAACAGCTGGACAACGAGGCGCTGATCCGCG AGCAGTACAAGGGCATCCGCCCTGCTCCCGGCTACCCGGCCTGCCCGGATCACACCGAGAAAGGCACGCTGTTCAAACTGCTCGACCCCGAAGCGGACTA CAACAAGGCCGGCCGCAGCGGTGTGTTCCTCACCGAGCACTACGCCATGTTCCCGGCGGCAGCGGTCTCCGGCTGGTACTTCGCCCACCCCGAGGCGCAG TACTTCGCCGTCGGCAAAGTCGACAAGGATCAGATCGAAAGCTACACCGCGCGCAAGGCGCAGGACATCGCCGTCAGTGAGCGCTGGCTGGCACCGAACC TCGGTTACGACGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAACAACAGGACCTGCGAACCCGCGCGGCGCCAGTCGCCGGGTTCTTTCTCTGCAAGGACGTACCCATGTATTACCGACTACCCGCCCTCTTTCTGTT CGCCCTGCTGACCGGCTGCGGCACCATCGCCTTCGACCCACCGGTGTTCGACCTGGCCGCCTCCAAGATCGCCGATTTCCCGGTCAAGGGAACGGTCACC GTCGAAAATGCCCAGCCTGCAACCGAGCCGGTGATCCTGCATTCGCAAAGCGGCACCCGCCTGCAATCGAGCTACCACGAAGTCACCAAGACCATGGTGA CTCAGGCTCGCTTCGAACTGGCGCGCCATGGCAAGGTTGGCTCCGGCAGCGACAAGCGCATCGACCTCAAGGTCACGCACCTGGAAAGCCGCTACATCTT TTACTACTGGAAAGGCACCATGACCTTCACCGTCAGCCTGGGTGATGGGCAGCGCTTCGAGATGACCGTGAATCACGCCACCGGTGCCGGCGCTCAGCAA
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| Amino Acid Sequence |
>methionine synthase
MPLSDRSARLQALQQALKERILILDGGMGTMIQSYKLEEADYRGERFADWPSDVKGNNDLLLLTQPQIIADIEKAYLDAGADILETNTFNATQVSQADYD MESIVYELNVAGARVAREVADAKTLETPDRPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYTEATRGLIEGGADLILIETIFDTLNAKAAIFA VQQVFDEDGVTLPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGAKELRPYLAELAAKAGTHVSAHPNAGLPNAFGEYDETPAQMAEVV EEFAASGLLNIIGGCCGTTPGHIQAIAEAVAKYQPRPIPEIPKACRLSGLEPFTIDRNSLFVNVGERTNITGSAKFARLIREENYTEALEVALQQVEAGA QVIDINMDEGMLDSKAAMVRFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHAKLCKRYGAAVVVMAFDEVGQADTAA RKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAYIRDQLPYALSSGGVSNVSFSFRGNNPVREAIHSVFLYYAIQNGLSMG IVNAGQLEIYDEIPKELRDAVEDVVLNRNDGATEALLAIADKYKGDGAAKEVENEEWRSLPVDKRLEHALVKGITAFIVEDTEECRRQCARPIEVIEGPL MSGMNVVGDLFGSGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQTAIAE KCDIIGLSGLITPSLDEMVHVAKEMQRQGFKLPLMIGGATTSKAHTAVKIDPQYSNDAVVYVTDASRAVGVATQLLSKELKADFVQKTRDEYVVVRERTA ARATRTERLSYDNAVANKPAFDWNGYVAPKPSFTGAQVLDDIDLNVLAEYIDWTPFFISWDLAGKYPRILTDEIVGEAATSLFNDAQAMLRKLIDEKLIK ARAVFGFWPANQVRDDDIEVYGDNGEQLATLHHLRQQTIKPDGKPNLSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYEAKGDDYNAIMVKALADR LAEACAEWLHERVRKEHWGYAADEQLDNEALIREQYKGIRPAPGYPACPDHTEKGTLFKLLDPEADYNKAGRSGVFLTEHYAMFPAAAVSGWYFAHPEAQ YFAVGKVDKDQIESYTARKAQDIAVSERWLAPNLGYDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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