Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4402
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGCCGTTGCAGGTTGACGCAAAAAAAAACGCTTCAGGACAAGCCGCTGGGCTGTTTCTCCAGGTGGGAGCCTTCGCCAACCCGGACGCTGCGGAGCTC CTGAGGTCGAAACTGAGCGGGATGGTTCGAGCGCCGGTGTTCGTCAGCTCGATAGCTCGCAATCAGCAAACGCTCTATCGGGTCCGGATGGGACCGATCG ACACGCCGGGTGAAGCCCAGCAACTGCAAAACAGCGTCAGGTCTGCCAATCTGGGTCAGCCAAGTGTAGTGACATCGGATCAATAAGTTTTTCGACAATC GTTTTCCAGCAACAATGGAGGACGATATGCAGTCGCAGGCAGCGCAGCTTTGCCATCAGGGCCAGCGTTGCAGGTAACTGCCCACAAGGTCGTGTGTCGA ACAGGCGACTTTGTCAGCCAGGGTTACAGCCTGGCGCCACGAGCCGTACCGAGGCGTTTTCGCCTCGCCGGTCTGTTCAGTTTTGCCCGCAAGGGCATGT
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| DNA Sequence for Gene |
>PSPPH_4402
TTGCCCATTAGGATTCTCGAGAGACGGATGAACATCACCACCTTTGCAAAACGTTTGTGCCTGCTTGTTCCACTGATTATTACCCCGACCGTCTGGGCGG CAGAGCAGATGACGCCTGCTGCGCCGCAACTGGCAGCCAAGTCCTACGTACTGATGGATGCCACCAGCGGCAACGTTCTGGTCGAGAACAACGGTGACCA GCGTCTGGCACCTGCCAGTCTGACCAAGCTGATGACTGCCTACATCGCGACCCTGGAAATTCGTCGCGGCCAGATCGGCGAGAACGATCCGGTGACCATC AGTGAAAATGCCTGGCGCACAGGCGGTTCGCGGATGTTCATCAAGGTGGGCAGCCAGGTGACGGTCAGCGACCTGCTGCACGGCATCATTATTCAATCGG GTAACGACGCCAGCGTCGCGATCTCCGAGCACATTGCCGGCAGCGAAGATGCATTTGCCGACATGATGAACAAGACCGCCGGCGATCTGGGCATGACCAA CAGCCACTTTATGAACCCGACCGGTCTGCCGAACCCCGAGCACTACTCGTCGGCTCACGACATGGCGATCCTGGCGCGTGCAATCATTCACGAAGACCCG GCTCACTATGCGATCTACTCGCAGAAAGAGTTCTTCTGGAACGGCATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACCGTTGACGGTC TGAAGACCGGTCACACCGACGAGGCCGGCTACTGCATGGTGTCTTCGGCTGTACGTGACGGCATGCGTCTGATCGCAGTAGTGTTCGGCACCAACAGCGA GCAGGCCCGTGCGGCTGAAACCCAGAAGCTGCTGACCTATGGCTTCCGTTTCTTCGAAACCCAGAACTTCTATCAGAAGGGCACCGAGCTGGCTCAGGCA ACCGTCTGGAAAGGCACCGAGCGTCAGGTCAAGGCCGGTCTGGCTGAAGATCTGAGCATGACCATGCCAAAAGGCGACATGAAGAAGCTGTCCGCCAGCA TGACCATGAACCCGCAACTGGTTGCGCCAATCGCCAAGGGCGACGTGATCGGTAAGGTCGAGGTCAAGAAAGACGATCAGGTGGTTCATACCGCTAACCT GATTGCGCTTGATGCAGTTGAGGAAGGTGGCATTTTCCGCCGCGTGTGGGATAGCATCCGCCTGTTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTCCAGTAACTACTGCCGACCTTCTCGCGGCCTGCTCATGATCTGAGCGGGCCGCGTGTCCGTCGTCACGGCTTGTGAGACCTTTACTGCCATGACTG ATACCGACATCAAGTCGCACAAAATCGAATTCCCCTGCGATGACTATCCGATCAAGGTGATCGGTGACACCAGCGTGGGCTTTACTGCTGCTGTTATGGA AGTCCTGCACAAGTACGCTCAGGTCGACCTCAAGACACTCGCCGAGCGTCAGAGCAGCAACGGCAAATACACCACCGTCCAGTTGCACATCGTCGCTACA GGCGAAGATCAATTGCGCGATATCAATAGTGCCCTTCGCGCTACGGGTTTCGTGCACATGGTGCTCTGATGACGGTTGCGCTGGGTTTTCGTGATCTGGG CCTGATCGATTACGAAACCGCCTGGCACGCCATGCAGCGCTTTACCGATGGGCGTGGCCGCGAGGCTGCCGATGAGGTCTGGCTGGTCCAGCATCCCCCG
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MPIRILERRMNITTFAKRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTKLMTAYIATLEIRRGQIGENDPVTI SENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIHEDP AHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQA TVWKGTERQVKAGLAEDLSMTMPKGDMKKLSASMTMNPQLVAPIAKGDVIGKVEVKKDDQVVHTANLIALDAVEEGGIFRRVWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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