Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4402

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.410.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004180 carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF69189
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.410.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00550 Peptidoglycan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07943 Penicillin-binding protein 5, C-terminal domain IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 285 375 3.1E-26
Gene3D G3DSA:2.60.410.10 - IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily 285 375 6.2E-27
SMART SM00936 PBP5_C_2 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 285 375 3.4E-34
SUPERFAMILY SSF69189 Penicillin-binding protein associated domain IPR015956 Penicillin-binding protein, C-terminal domain superfamily 285 377 8.04E-25
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 17 285 2.37E-90
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 125 142 4.6E-16
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 72 83 4.6E-16
PANTHER PTHR21581 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE - - 38 292 7.3E-46
Pfam PF00768 D-alanyl-D-alanine carboxypeptidase IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal 36 265 4.3E-88
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 152 165 4.6E-16
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 34 284 2.4E-97

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.