Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1708

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd08497 PBP2_NikA_DppA_OppA_like_14 - - 85 633 0.0
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 159 563 7.7E-73
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 94 649 1.1E-119
Gene3D G3DSA:3.40.190.10 - - - 72 647 0.0
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 49 652 4.4E-101
Gene3D G3DSA:3.10.105.10 - - - 369 627 0.0
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 51 649 1.3E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.