Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1708

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCTATCAGGTCACGGTCAGCTCGCTCAAGGGCAATAACAAGCTGTCCGGCAACCGCCTGAAGGTCGGTCAATCACTGAGCATACCGGTCAAGCCGGGCA TGCAGAATTCACAGCCCGTGTTCGAAGCGTTGGCCAGCAACGACAAGCCGTCACGTACCCGAAGTTACAAGGTGCGCAGCGGTGACAACCTGACCACCAT CGCGCAAGCCAACAAGGTGGATGTCGAAGACCTGCAACGCTGGAACAAGCTGACCGGCAAGAAGCTCAAGGTCGGCCAGACGCTGGTCATGCAGGACACC AGCAAATCCAGCAGTAAAACGGTCGCCAGCGCCAAAGACGGCGAAAAGAAATCCATGCAGTACAAGATCCAGAAAGGCGACTCGATGTACCTGGTCGCCA AGCGCTTTAACGTCGAGATGCAGCATCTCAAGCGCTGGAATCCACGTAGCGGGCAGGCCCTCAAACCCGGTCAGACCCTGACCGTTTACCTGCCGCACTG
DNA Sequence for Gene
>PSPPH_1708
ATGACCTCGGCCACTTGCCCTTCGATAACCTTGGGGCGGGTGGCCGATGCAGCCCCGGCGGCGCAGTCACCTGCAGTCTTTTTCCAGCTGGAACAAGCTG TTACTGTTAGCGACCCGAAAGCCCAAGTCGCCTGGATCGTGATACGTCCCTTCCTGCTAACCATCAGCCTGGCCTTGAGCTTCTGCGCCAACGCAGCCAT CACAGAAAGTCATGGCTACGCGCAGTTTGGTGTTCTCAAGTACCCGGCCAGCTTTACTCATTTCGACTGGGTCAATCCCGAGGCGCCGAAAGGTGGCACC TTGAGAATGATGGCGTTTGGTACGTTCGACACGCTCAACCCTTACACATTCAAGGGCAGCAGCCCGGTCTCGACCGGAAACTTCCTGCAATACGGCGTCA ATGAACTGAACGAGCCGTTGATGGTGGGCACAGGGCAGTACGACCCGTCCGGCGATGAACCGACCTCCAGTTACGGGCTGATCGCCCAGTCCGTTGAATA CAGCGAGGACCGCAGCTGGGTGGTGTTCAACCTGCGCCCGCAGGCGCGCTTTCACGATGGCAAGCCCATCACCGCCTACGACGTCGCGTTTTCCTACCGA ACGCTGCTCAAGGACGGTCATCCTCAATACCGCACCGCCTTGCAGGAAGTGCAGCTCATCGACATCCTCAATCGTCATCGCATCCGGTTTGTCTTCAAGC GCTCTGGCAATCCGTTGCTGATTCTGCGTCTTGGGGAACTGCCAGTGCTGCCCCAGCATTACTGGAAGAACAGAGACTTCAAAGCGACTACCTTCGAACC GCCGCTGGGCAGTGGTCCCTACCGCATCACCCGCGTGCAGCCCGGACGTCAGCTGGTGTTCGAGCGGGTCAAGGATTACTGGGGCAAGGACCTGCCGGTC AACCGCGGCAAATACAATTTCGACCGGGTGGAAGTCGAGTTCTACCGCGACAGCGATGTGGCGTTCGAAGCATTCAAGGCGGGCGAATTCGATATCTACA TCGAGCATCAGGCCAAGAACTGGGCCAATGGCTATAACTTCCCGGCAGTCGCAAACGGTCAGGTAATCAAGGCGCAGATTCCGCACCGCATACCGACCCA GACCCAAGGCCTGTTCATGAACACCCGGCGCGCGGCCTTCGCCGATATCCGCGTACGCGAAGCACTGGGGCTGTTGTTCAATTTCGAATGGACCAACCGC ACACTGTTCAGCGACGCTTATGAGCGTTCGACCAGCTATTACCCCAACAGCGAGTTTTCAGCGACGGGCCTGCCGAGCGGGGCTGAATGGTTATTGCTGG CGCCTTATCGCGATCAGTTGCCCGCCAGTCTGTTTACCCAGCCATTTGCCCCATCGAAAACCGATGGCGGCGGCATCCCGCGCGACACTCTGCGCAAGGC CTTGAAACTGCTTGCCGATGCTGGCTGGACGCTGTCGGACAAGGGCTTGCTCAACGCCGACAAGCAACCGCTGCGCTTCGAGATCCTGCTGGTCAACCCC AACCTCGAACGCATCCTGCAGCCCTACATTGAAGACCTGCGACGCCTGGGTATCTATGCAGGGCTGCGCACCGTCGATCGCGCCCAGTACAAACAACGCC TGGACCGTTTCGACTTCGACATGATTCTCATGACACTGCAACAGACGCTGAGCCCTGGTCTTGAGCAGTGGCAATATTTTCATTCAAGCCAGGCCGCGAT CAACGGCAGCAAGAACTACGCCGGCATTGCCAACCCGGTGGTCGACGCCCTGCTGAACAAACTGCTCGGCGCGCAAACCCGCGATGAACAGGTCGCGGCT GCGCGAGCGCTGGACCGCGTGCTGCTGGCTCAGCACTACAGCATTCCCAACTGGTATCTGAACAATCATCGGCTTGCCTATCGCAACCGATTCGCCATGG TCACCACCCCGCCCTACACACTGGGGCTGCGTGCGTGGTGGCTCAAGACTCTGGAGAAGCCCCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCATTGCATTCCCTGCGCGCGCAAGCGGCCGGCCTGCTGTTGGCCAGCCTCGCCTGCACGGTACAGGCTGCGCCTCAGCATGGCGTGACGCTGTACGA CGAGCCGCCCAAGTACCCGGCCGACTTCAAGCACTTCGACTACGTGAACCCGGATGCGCCCAAGGGTGGCACGTTCCGCCAGGCAAGCTTCGGCGGTTTC GACAGCCTCAACCCGTTCATCAACAAGGGCGTGCCGGCAGATGACATCGGCCTGATCTACGACACCCTGGCCCGTGCAAGCCTGGATGAACCGTTCAGTG AGTACGGGCTGGTTGCCGGTAAAATCGAGAAAGCCCCGGACAACAGCTGGGTACGCTTCTACCTGCGCCCGGAAGCGCGCTTTCATGACGGCCACCCGAT GCGTGCAGAAGACGTGGAGTTCAGCTTCAAGACACTGATGGAGCACGGGTCGCCCATGTACAAGGGTTACTACGCCGACGTCGATCAGGTGGTCGTCGAA
Amino Acid Sequence
>ABC transporter substrate-binding protein
MTSATCPSITLGRVADAAPAAQSPAVFFQLEQAVTVSDPKAQVAWIVIRPFLLTISLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGT LRMMAFGTFDTLNPYTFKGSSPVSTGNFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYR TLLKDGHPQYRTALQEVQLIDILNRHRIRFVFKRSGNPLLILRLGELPVLPQHYWKNRDFKATTFEPPLGSGPYRITRVQPGRQLVFERVKDYWGKDLPV NRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYNFPAVANGQVIKAQIPHRIPTQTQGLFMNTRRAAFADIRVREALGLLFNFEWTNR TLFSDAYERSTSYYPNSEFSATGLPSGAEWLLLAPYRDQLPASLFTQPFAPSKTDGGGIPRDTLRKALKLLADAGWTLSDKGLLNADKQPLRFEILLVNP NLERILQPYIEDLRRLGIYAGLRTVDRAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLNKLLGAQTRDEQVAA ARALDRVLLAQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAWWLKTLEKPR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site