Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 527 | 683 | 1.54255E-62 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 515 | 686 | 4.7E-60 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 531 | 684 | 1.96E-48 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 517 | 685 | 4.6E-57 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 339 | 684 | 6.3E-70 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 174 | 203 | - |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 524 | 684 | 4.2E-49 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 311 | 340 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 520 | 685 | 6.9E-52 |
| Coils | Coil | Coil | - | - | 410 | 444 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 526 | 682 | 6.6E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.